Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T148200.1 |
Family | CE8 |
Protein Properties | Length: 543 Molecular Weight: 59533.6 Isoelectric Point: 10.1195 |
Chromosome | Chromosome/Scaffold: 495 Start: 4375 End: 6341 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 231 | 526 | 0 |
DVVVAADGSGNYKTVSAAVAAAPKYSSKRYIIRIKAGVYRENVEVPKEKSNIMFLGDGRKTTIITGSRNVVGGSTTYHSATVAVEGQGFLARDITFQNTA GPSKYQAVALRVESDFAAFYKCGMLGYQNTLYVHSNRQFFRNCFIAGTIDFIFGNAAAVFQDCDIRARRPNLGQTITITAQGRSDPTQNTGIVIQKCRIG VTSDLHPVRSNFSAYLGRPWKEYARTVIMQSSISDVIHPAGWNGLKGRFALSTLSFAEYENSGAGAGTSERVTWEGYKMITSATEAQSFTPRNFIA |
Full Sequence |
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Protein Sequence Length: 543 Download |
MTEANQYNIS ISKKKKKLIL AIFASFLLVA TIIAIVTGVN PKKNSTRNDA ADYAKLVKST 60 FQKNDFLLQV NRSIDAAQSN KVALSKKLAK SMKLDVRQRT AINDCWENND RVVTDLKKVF 120 GKVKVDTTNA DQDLNTKFAS CMTGVNSCLD GFSHSKQDKK VREALSDLID VRGNCTKALE 180 MIKSKPTADT ATGLKTTNRK LKEDNDSNEG GTEWLSVTDR RLFQLSSLTP DVVVAADGSG 240 NYKTVSAAVA AAPKYSSKRY IIRIKAGVYR ENVEVPKEKS NIMFLGDGRK TTIITGSRNV 300 VGGSTTYHSA TVAVEGQGFL ARDITFQNTA GPSKYQAVAL RVESDFAAFY KCGMLGYQNT 360 LYVHSNRQFF RNCFIAGTID FIFGNAAAVF QDCDIRARRP NLGQTITITA QGRSDPTQNT 420 GIVIQKCRIG VTSDLHPVRS NFSAYLGRPW KEYARTVIMQ SSISDVIHPA GWNGLKGRFA 480 LSTLSFAEYE NSGAGAGTSE RVTWEGYKMI TSATEAQSFT PRNFIAGSSW LKSTTFPFSL 540 DL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 6.0e-145 | 95 | 542 | 456 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 3.0e-146 | 95 | 538 | 451 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-158 | 95 | 539 | 449 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 231 | 528 | 298 | + Pectinesterase. | ||
PLN02313 | PLN02313 | 0 | 57 | 542 | 505 | + Pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002309640.1 | 0 | 1 | 542 | 1 | 542 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002309641.1 | 0 | 1 | 542 | 1 | 567 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331121.1 | 0 | 1 | 542 | 1 | 572 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331123.1 | 0 | 1 | 542 | 1 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002336803.1 | 0 | 1 | 542 | 1 | 542 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 226 | 542 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 228 | 534 | 1 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 5e-26 | 242 | 500 | 18 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-26 | 242 | 500 | 18 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 9e-26 | 242 | 500 | 18 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |