Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T151500.1 |
Family | CE8 |
Protein Properties | Length: 573 Molecular Weight: 62720.9 Isoelectric Point: 9.7397 |
Chromosome | Chromosome/Scaffold: 533 Start: 19083 End: 21172 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 261 | 556 | 0 |
DVVVAADGSGKYRTVSAAVAAAPKHSAKRYIIKIKAGVYRENVEVPSEKTNIMFLGDGRKKTIITASRNVVDGGTTYHSATVAVVGQGFLARDITFQNTA GASKYQAVALRVESDFAAFYKCGMLAYQNTLYVHSNRQFFTNCYIAGTVDFIFGNSAAVFQDCDIRARRPNPGQTITITAQGRSDPNQNTGIVIQKSRIG ATPDLQHARSNFSAYLGRPWKEYSRTVIMQSSISDVISPAGWREWKGRFALNTLHFAEYENSGAGAGTAGRVPWKGYKVITDATEAQAFTARNFIT |
Full Sequence |
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Protein Sequence Length: 573 Download |
MTQAGQYTSM SKKNKRLVLA IFASFLLVAT IIAIAIGVNS HKNSTKNDAA HALLMASCNS 60 TRYPDLCYSA ATSFPDASGG DPKAVILNNI NATIDAINSK KIKANSILST KDLTEQQKTA 120 LKDCRQNYDS SLADLEKVWG ALTRNPNNQL LQQQSYADQL TTQVTSCKTN EDSCLDGFSH 180 KSLLRELREW FHDPSKDDAG NMCSNTLALI KKLIENTKAI ANRLKTTSRK LKEEDDSAEG 240 WPEWLSVTDR RLFQSSLLTP DVVVAADGSG KYRTVSAAVA AAPKHSAKRY IIKIKAGVYR 300 ENVEVPSEKT NIMFLGDGRK KTIITASRNV VDGGTTYHSA TVAVVGQGFL ARDITFQNTA 360 GASKYQAVAL RVESDFAAFY KCGMLAYQNT LYVHSNRQFF TNCYIAGTVD FIFGNSAAVF 420 QDCDIRARRP NPGQTITITA QGRSDPNQNT GIVIQKSRIG ATPDLQHARS NFSAYLGRPW 480 KEYSRTVIMQ SSISDVISPA GWREWKGRFA LNTLHFAEYE NSGAGAGTAG RVPWKGYKVI 540 TDATEAQAFT ARNFITGSSW LKSTTFPFSL GL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 9.0e-148 | 12 | 572 | 572 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 2.0e-149 | 12 | 572 | 579 | + pectinesterase | ||
PLN02301 | PLN02301 | 5.0e-152 | 21 | 572 | 563 | + pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 12 | 572 | 576 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 261 | 558 | 298 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAC18726.1 | 0 | 1 | 572 | 1 | 574 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
EMBL | CAC18727.1 | 0 | 39 | 572 | 1 | 536 | putative pectin methylesterase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002331120.1 | 0 | 10 | 572 | 1 | 563 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331121.1 | 0 | 1 | 572 | 1 | 572 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331123.1 | 0 | 1 | 572 | 1 | 573 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 254 | 572 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 258 | 572 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 5e-25 | 262 | 547 | 7 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-25 | 262 | 547 | 7 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-25 | 262 | 547 | 7 | 327 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |