Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T167100.1 |
Family | GH17 |
Protein Properties | Length: 331 Molecular Weight: 36132 Isoelectric Point: 6.9439 |
Chromosome | Chromosome/Scaffold: 899 Start: 11976 End: 13794 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 12 | 326 | 0 |
VGICYGMMGNDLPPATEVIALYKQHNIKRMRLYDPNQAALNALRDSGIEVMLGVPNSDLQRLSNPSDANSWVKNNVLNFWPSVRFRYIAVGNEISPVNGG TSWMAPFVLPALVNVFNAVRAAGLQDQIKVSIAVDMTLIGTSYPPSAGAFRGDVISYLAPIVGHLSYAKTPLFANIYTYFSYSDNPRDISLPYALFTSPS VLVWDSGRGYQNLFDAMLDSLYSALERLGGGNTLDVVVSESGWPSAGGFGTTSDNAGTYLSNLIRHVEGGTPKRPGRAIETYIFAMFDENQKQPELEKHF GAFSPNKQPKYNLNF |
Full Sequence |
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Protein Sequence Length: 331 Download |
MVQNFCDSGA QVGICYGMMG NDLPPATEVI ALYKQHNIKR MRLYDPNQAA LNALRDSGIE 60 VMLGVPNSDL QRLSNPSDAN SWVKNNVLNF WPSVRFRYIA VGNEISPVNG GTSWMAPFVL 120 PALVNVFNAV RAAGLQDQIK VSIAVDMTLI GTSYPPSAGA FRGDVISYLA PIVGHLSYAK 180 TPLFANIYTY FSYSDNPRDI SLPYALFTSP SVLVWDSGRG YQNLFDAMLD SLYSALERLG 240 GGNTLDVVVS ESGWPSAGGF GTTSDNAGTY LSNLIRHVEG GTPKRPGRAI ETYIFAMFDE 300 NQKQPELEKH FGAFSPNKQP KYNLNFGKKL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 8.0e-7 | 13 | 318 | 327 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 4.0e-158 | 12 | 326 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABG49448.1 | 0 | 8 | 329 | 34 | 354 | beta-1,3-glucanase [Hevea brasiliensis] |
GenBank | ABK96486.1 | 0 | 2 | 329 | 26 | 353 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ACZ74626.1 | 0 | 8 | 329 | 34 | 354 | beta-1,3-glucanase [Hevea brasiliensis] |
RefSeq | XP_002314934.1 | 0 | 2 | 327 | 10 | 335 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314939.1 | 0 | 18 | 330 | 1 | 313 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 11 | 326 | 1 | 315 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3f55_C | 0 | 11 | 326 | 1 | 315 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3f55_B | 0 | 11 | 326 | 1 | 315 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3f55_A | 0 | 11 | 326 | 1 | 315 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 3em5_D | 0 | 11 | 326 | 1 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CF936074 | 272 | 2 | 273 | 0 |
DT503453 | 259 | 2 | 260 | 0 |
DV465931 | 258 | 2 | 259 | 0 |
DV465310 | 249 | 2 | 250 | 0 |
DT515134 | 233 | 95 | 327 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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