Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s109_183V6.2 |
Family | GH17 |
Protein Properties | Length: 172 Molecular Weight: 18584 Isoelectric Point: 4.1867 |
Chromosome | Chromosome/Scaffold: 109 Start: 1076476 End: 1077639 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 2 | 161 | 1.6e-39 |
GIKKVKIFDADPDVVRSMAGTDIEVMVAAPNDMLATLAKDPEASDAWVRENVTSLNFEEGVYIRWVAVGNEPFLTAYEGVYLTTTVPALRNIVNAVANAG LADTVKATIPFNADILNGAIFNSTGTPFSVNLYPFLSKYQSPDFPLGYAFFEGSTASVVD |
Full Sequence |
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Protein Sequence Length: 172 Download |
MGIKKVKIFD ADPDVVRSMA GTDIEVMVAA PNDMLATLAK DPEASDAWVR ENVTSLNFEE 60 GVYIRWVAVG NEPFLTAYEG VYLTTTVPAL RNIVNAVANA GLADTVKATI PFNADILNGA 120 IFNSTGTPFS VNLYPFLSKY QSPDFPLGYA FFEGSTASVV DGPHYWEKYS V* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-27 | 2 | 165 | 186 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG29689.1 | 0 | 2 | 161 | 46 | 229 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
RefSeq | NP_001130924.1 | 0 | 2 | 161 | 47 | 230 | hypothetical protein LOC100192029 [Zea mays] |
RefSeq | XP_001757439.1 | 0 | 2 | 162 | 53 | 234 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773368.1 | 0 | 2 | 162 | 52 | 233 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002324967.1 | 0 | 2 | 162 | 34 | 218 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 8e-17 | 3 | 168 | 27 | 209 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 8e-16 | 3 | 162 | 28 | 207 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 8e-16 | 3 | 162 | 28 | 207 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 8e-16 | 3 | 162 | 28 | 207 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 8e-16 | 3 | 162 | 28 | 207 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC371960 | 187 | 2 | 167 | 0 |
FC361938 | 182 | 2 | 162 | 0 |
FC402910 | 178 | 2 | 158 | 0 |
BY946467 | 148 | 2 | 128 | 0 |
GT248281 | 185 | 2 | 162 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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