Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s10_144V6.1 |
Family | GH35 |
Protein Properties | Length: 925 Molecular Weight: 102441 Isoelectric Point: 7.8488 |
Chromosome | Chromosome/Scaffold: 10 Start: 918432 End: 925566 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 42 | 345 | 0 |
LIINGQRRMLISAGIHYPRATPEMWPSLVQKSKEGGADVVQSYVFWNGHEPKQGQYNFEGRYDLVKFIKVVQQAGLYFHLRIGPYVCAEWNFGGFPYWLK DIPGIVFRTDNEPFKVAMEGFVSKIVNLMKENQLFAWQGGPIIMAQIENEYGNIEWAFGDGGKRYAMWAAELALGLDAGVPWVMCQQDDAPGNIINTCNG YYCDGFKANTATKPAFWTEDWNGWFQYWGQSVPHRPVEDNAFAIARFFQRGGSFQNYYMYFGGTNFARTAGGPFMTTSYDYDAPLDEYGLIRQPKWGHLR DLHA |
Full Sequence |
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Protein Sequence Length: 925 Download |
MGNLDRSLHV FLLLLLLLSV ASIVPIASAR KPINVTYDQR ALIINGQRRM LISAGIHYPR 60 ATPEMWPSLV QKSKEGGADV VQSYVFWNGH EPKQGQYNFE GRYDLVKFIK VVQQAGLYFH 120 LRIGPYVCAE WNFGGFPYWL KDIPGIVFRT DNEPFKVAME GFVSKIVNLM KENQLFAWQG 180 GPIIMAQIEN EYGNIEWAFG DGGKRYAMWA AELALGLDAG VPWVMCQQDD APGNIINTCN 240 GYYCDGFKAN TATKPAFWTE DWNGWFQYWG QSVPHRPVED NAFAIARFFQ RGGSFQNYYM 300 YFGGTNFART AGGPFMTTSY DYDAPLDEYG LIRQPKWGHL RDLHAAIKLC EPALTAVDEV 360 PLSTWLGPNV EAHVYSGRGQ CAAFLANIDS WKIATVQFKG KAYVLPPWSV SILPDCKNVV 420 FNTAQVGAQT TLTRMTIVRS KLEGEVVMPS NMLRKHAPES IVGSGLKWEA SVEPVGIRGA 480 ATLVSNRLLE QLNITKDSTD YLWYSISIKV SVEAVTALSK TKSQAILVLG SMRDAVHIFV 540 NRQLVGSAMG SDVQVVQPVP LKEGKNDIDL LSMTVGLQNY GAYLETWGAG IRGSALLRGL 600 PSGVLDLSTE RWSYQVGIQG EEKRLFETGT ADGIQWDSSS SFPNASALTW YKTTFDAPKG 660 TDPVALDLGS MGKGQAWVNG HHMGRYWPSV LASQSGCSTC DYRGAYDADK CRTNCGKPSQ 720 RWYHIPRAWL QLSNNLLVLF EEIGGDVSKV SLVTRSAPAV CTHVHESQPP PVLFWPANSS 780 MDAMSSRSGE AVLECIAGQH IRHIKFASFG NPKGSCGNFQ RGTCHAMKSL EVARKACMGM 840 HRCSIPVQWQ TFGEFDPCPD VSKSLAVQVF CSSKGSQQAT DEPVPPAYYF NYQWQQPIGM 900 NDHLYQRKVP LITPVNVNKY SSVA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.002 | 57 | 193 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-17 | 793 | 871 | 83 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 5.0e-21 | 35 | 337 | 345 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 5.0e-157 | 41 | 347 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 34 | 872 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF31232.1 | 0 | 6 | 873 | 5 | 880 | beta-D-galactosidase [Persea americana] |
RefSeq | XP_001753645.1 | 0 | 1 | 924 | 1 | 929 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775275.1 | 0 | 19 | 912 | 16 | 912 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002328900.1 | 0 | 4 | 873 | 7 | 882 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 27 | 876 | 32 | 891 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2.99878e-43 | 39 | 343 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.000004 | 495 | 687 | 374 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-39 | 28 | 343 | 4 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 0.004 | 568 | 689 | 450 | 571 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-39 | 28 | 343 | 4 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |