y
Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s110_112V6.1 |
Family | GH1 |
Protein Properties | Length: 536 Molecular Weight: 60585.3 Isoelectric Point: 5.9403 |
Chromosome | Chromosome/Scaffold: 110 Start: 981355 End: 984580 |
Description | beta glucosidase 42 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 63 | 532 | 0 |
SLFPQNFVFGAATAAYQVEGAANESGREPSIWDTFSHTPGKVLHNHTGDVASDQFHKFLDDIDLMTQLNVDAYRFSISWSRIMKLGGSNPVVNEEGMAYY NNLINGLLKKGIQPYVTLYHWDLPQSLQDSYGGWLDRRIVNDFTQYAEACFTAFGDRVKHWITFNEPKSFTVLGFGNGIHAPGRCSDRTLCPAGNTSTEP YITAHHVLLAHAAAADVYRKKFKDTQGGMIGISVDSEWSEPLTSSVEDKEAAERHTLFQLGWFLDPIYRGDYPAIMRTHVGARLPVFTADEVALLKGSLD FIGLNHYSSRWISNGVRVENSLNSDNWNDQAIESSVTRNGTQIGDVAASEWLFIVPWGIGKTLVWLTQRYENPPLFVTENGMDDLDSDKPMAVLLNDTTR VAFYENYLFSVLEAIRNGSDVRGYFAWSLMDNFEWAMGYTRRFGMLYVDYNNNQQRHLKESAKWFSRFLS |
Full Sequence |
---|
Protein Sequence Length: 536 Download |
MMGRDGLPFL IFALVALSMF LLFLQLPREE LSPPRNDPTV LPCKLHNIAK HANDTTCEPF 60 HRSLFPQNFV FGAATAAYQV EGAANESGRE PSIWDTFSHT PGKVLHNHTG DVASDQFHKF 120 LDDIDLMTQL NVDAYRFSIS WSRIMKLGGS NPVVNEEGMA YYNNLINGLL KKGIQPYVTL 180 YHWDLPQSLQ DSYGGWLDRR IVNDFTQYAE ACFTAFGDRV KHWITFNEPK SFTVLGFGNG 240 IHAPGRCSDR TLCPAGNTST EPYITAHHVL LAHAAAADVY RKKFKDTQGG MIGISVDSEW 300 SEPLTSSVED KEAAERHTLF QLGWFLDPIY RGDYPAIMRT HVGARLPVFT ADEVALLKGS 360 LDFIGLNHYS SRWISNGVRV ENSLNSDNWN DQAIESSVTR NGTQIGDVAA SEWLFIVPWG 420 IGKTLVWLTQ RYENPPLFVT ENGMDDLDSD KPMAVLLNDT TRVAFYENYL FSVLEAIRNG 480 SDVRGYFAWS LMDNFEWAMG YTRRFGMLYV DYNNNQQRHL KESAKWFSRF LSRGV* 540 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 5.0e-137 | 65 | 527 | 470 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02849 | PLN02849 | 8.0e-138 | 60 | 531 | 480 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 1.0e-138 | 58 | 532 | 483 | + beta-glucosidase | ||
TIGR03356 | BGL | 5.0e-166 | 66 | 527 | 465 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 65 | 533 | 472 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABW76289.1 | 0 | 58 | 535 | 19 | 486 | beta-glucosidase G4 [Medicago truncatula] |
GenBank | ACN41025.1 | 0 | 38 | 533 | 3 | 494 | unknown [Picea sitchensis] |
RefSeq | XP_001765414.1 | 0 | 49 | 533 | 3 | 490 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001769105.1 | 0 | 1 | 535 | 1 | 535 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771505.1 | 0 | 25 | 533 | 29 | 536 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 62 | 532 | 14 | 487 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3gnp_A | 0 | 62 | 532 | 14 | 487 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
PDB | 3gno_A | 0 | 62 | 532 | 14 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 62 | 532 | 17 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 62 | 532 | 17 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |