| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s114_165V6.1 |
| Family | GH2 |
| Protein Properties | Length: 894 Molecular Weight: 100916 Isoelectric Point: 4.574 |
| Chromosome | Chromosome/Scaffold: 114 Start: 1036616 End: 1041927 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH2 | 9 | 696 | 0 |
| ILNEGWVAARASDVQLRGQDLTTSQFPSLNSDLWMEAVVPGTVLTTLLKNDLVPDPFYGLNNLEVPDIADVGREYYTFWFCNRFKLPRVPQDGKVWLNFR AINYQAEVFLNGFSVLLSKGMFLRHTIDITDWLNVYEENRLAVLVHPPDHPGRIPPEGGQGGDHDIAKDVAAQYVEGWDWICSIGDRNTGIWDVVSIQQT GPVRLVDPHLVATFHNSYTQADLWMTTELFNACSTRVTVTVTLNVSLDDASEFCIVDHVHTSEDIVLEGNSTKLYSIPPLPFQSPALWWPNGLGDQPLYK VDITLDVREYGESDSWSHLFGFRHIDSYIDPSTNGRTFVVNGEPIFIRGGNWIVSDGLLRLSKDRYETEVNFHADMNLNMIRIWGGALAERPEFYTACDK RGLLVWQEFWITGDCNGRGIEPSDPNWPLDHDLFLTCAHDTVKLLRNHASLALWCGGNEQHPAADINEALEKNLKIVTSGENPSMSLDGTRLYIQGSLWS GIAAGNGLFRDGPYGIQVPENFFEMDYYKYAFNPEIGNVGVPKAETIRATMPPEAWDPPSLLNGEHPNSTWDYHKYIPYADAQKLVPGQIEAFGEYDGLD DFCEKAQLVNYFQYRALFEGWNSWMWTKYTGLLIWKTQNPWPGLRGQMYDFLLDQTGAFFGLRSAAESVHVQLNLLNYNIEIVNTTRE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 894 Download |
| MATNLQSIIL NEGWVAARAS DVQLRGQDLT TSQFPSLNSD LWMEAVVPGT VLTTLLKNDL 60 VPDPFYGLNN LEVPDIADVG REYYTFWFCN RFKLPRVPQD GKVWLNFRAI NYQAEVFLNG 120 FSVLLSKGMF LRHTIDITDW LNVYEENRLA VLVHPPDHPG RIPPEGGQGG DHDIAKDVAA 180 QYVEGWDWIC SIGDRNTGIW DVVSIQQTGP VRLVDPHLVA TFHNSYTQAD LWMTTELFNA 240 CSTRVTVTVT LNVSLDDASE FCIVDHVHTS EDIVLEGNST KLYSIPPLPF QSPALWWPNG 300 LGDQPLYKVD ITLDVREYGE SDSWSHLFGF RHIDSYIDPS TNGRTFVVNG EPIFIRGGNW 360 IVSDGLLRLS KDRYETEVNF HADMNLNMIR IWGGALAERP EFYTACDKRG LLVWQEFWIT 420 GDCNGRGIEP SDPNWPLDHD LFLTCAHDTV KLLRNHASLA LWCGGNEQHP AADINEALEK 480 NLKIVTSGEN PSMSLDGTRL YIQGSLWSGI AAGNGLFRDG PYGIQVPENF FEMDYYKYAF 540 NPEIGNVGVP KAETIRATMP PEAWDPPSLL NGEHPNSTWD YHKYIPYADA QKLVPGQIEA 600 FGEYDGLDDF CEKAQLVNYF QYRALFEGWN SWMWTKYTGL LIWKTQNPWP GLRGQMYDFL 660 LDQTGAFFGL RSAAESVHVQ LNLLNYNIEI VNTTREPLSE SIVEASFFDL SGEKKYFDTL 720 RGLTVAPKTT TTVGNIPLFK SINDDPTYFV LLKYLSSSGT LISRNFYWLH PAGGSYTQLG 780 GKFRSNKFPI TGSAWCTVTD GSYILHVRVA NTNTEDVPNI AFGLYFTVID ADCTALDKRI 840 LPVTYSDNWF SLVPNEALDF EITFKVRESN VRPKLLLRGW NVEDTEVALE IHQ* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10150 | PRK10150 | 9.0e-5 | 21 | 153 | 134 | + beta-D-glucuronidase; Provisional | ||
| pfam02837 | Glyco_hydro_2_N | 4.0e-8 | 85 | 163 | 79 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 3.0e-8 | 92 | 467 | 387 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 2.0e-9 | 211 | 331 | 121 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| COG3250 | LacZ | 7.0e-42 | 44 | 838 | 847 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE97370.1 | 0 | 3 | 884 | 2 | 940 | endo-beta-mannosidase [Brassica oleracea] |
| RefSeq | NP_563833.2 | 0 | 9 | 884 | 8 | 938 | glycoside hydrolase family 2 protein [Arabidopsis thaliana] |
| Swiss-Prot | Q5H7P5 | 0 | 9 | 889 | 5 | 952 | EBM_LILLO RecName: Full=Mannosylglycoprotein endo-beta-mannosidase; Short=Endo-beta-mannosidase; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 31 kDa subunit; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 28 kDa subunit; Contains: RecName: Full=Mannosylglycoprotein endo-beta-mannosidase 42 kDa subunit |
| RefSeq | XP_001768060.1 | 0 | 3 | 889 | 8 | 898 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001769395.1 | 0 | 1 | 893 | 1 | 892 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 35 | 882 | 74 | 891 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 35 | 882 | 74 | 891 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_B | 0 | 35 | 882 | 74 | 891 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x09_A | 0 | 35 | 882 | 74 | 891 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2x05_B | 0 | 35 | 882 | 74 | 891 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DC919043 | 204 | 301 | 504 | 0 |
| DC905155 | 206 | 1 | 206 | 0 |
| ES793920 | 333 | 375 | 689 | 0 |
| GO871600 | 333 | 304 | 613 | 0 |
| FE492014 | 257 | 344 | 592 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |