Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s115_190V6.1 |
Family | GH5 |
Protein Properties | Length: 488 Molecular Weight: 55127.8 Isoelectric Point: 8.6954 |
Chromosome | Chromosome/Scaffold: 115 Start: 1071020 End: 1073067 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 115 | 457 | 1.6e-32 |
NGKRLFVNGANMYYLMTLGSYPEGRRLVTEILRESAGLGVTVVRIWAFADGDANYNLQTRPGVYTEAVFQGLDYAVAEAKKVGIRLILSFVNNYADYGGR KQYATWAQRYAGKWNAKEDDFYTDGTIRQWYRNHIRKVITRVNTYTRVAYRNEPAIFAWELMNEPRCESDKSGNVLQRWIQEMARFVKSLDRNHMLEVGL EGFYSSQVAPDSIYSQKANPGHPSNYASQFGTDYVRNNLIPGIDFATVHSYPDSWLPNRSEYDRRAFMALWIRTHISDAKYKLNKPVLFAEYGKSDRTPG YNPSNRYNDMADMFNAVYASARSGGPAAGAMVWHFVPKSLKYN |
Full Sequence |
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Protein Sequence Length: 488 Download |
MTSAMRKSDT RPVDLALLLG LIIIVASTWT CANAGASTND FTVDDSDDRD FDSFASQYYT 60 ASEESGNDIL DTESNSDYID PGSDRITLAS NHPIQPTPVW RGRFVQARGQ QFVLNGKRLF 120 VNGANMYYLM TLGSYPEGRR LVTEILRESA GLGVTVVRIW AFADGDANYN LQTRPGVYTE 180 AVFQGLDYAV AEAKKVGIRL ILSFVNNYAD YGGRKQYATW AQRYAGKWNA KEDDFYTDGT 240 IRQWYRNHIR KVITRVNTYT RVAYRNEPAI FAWELMNEPR CESDKSGNVL QRWIQEMARF 300 VKSLDRNHML EVGLEGFYSS QVAPDSIYSQ KANPGHPSNY ASQFGTDYVR NNLIPGIDFA 360 TVHSYPDSWL PNRSEYDRRA FMALWIRTHI SDAKYKLNKP VLFAEYGKSD RTPGYNPSNR 420 YNDMADMFNA VYASARSGGP AAGAMVWHFV PKSLKYNLAD GYGIVISENP AIATLMHRQS 480 ARMARLR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0006 | 143 | 419 | 279 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-25 | 112 | 415 | 312 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAN34823.1 | 0 | 103 | 486 | 36 | 406 | endo-beta-mannanase [Daucus carota] |
GenBank | ACN78664.1 | 0 | 104 | 487 | 27 | 395 | endo-beta-mannanase [Malus x domestica] |
RefSeq | XP_001752613.1 | 0 | 104 | 486 | 47 | 427 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001756296.1 | 0 | 104 | 486 | 66 | 447 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001769553.1 | 0 | 1 | 487 | 1 | 487 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 104 | 486 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 108 | 420 | 17 | 318 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 108 | 420 | 17 | 318 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 108 | 420 | 17 | 318 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 108 | 420 | 17 | 318 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |