Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s120_66V6.1 |
Family | GT4 |
Protein Properties | Length: 946 Molecular Weight: 107012 Isoelectric Point: 7.0113 |
Chromosome | Chromosome/Scaffold: 120 Start: 428676 End: 433570 |
Description | sucrose synthase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 663 | 825 | 0 |
DKDKPILFTMARLDRVKNLTGLVELYGKNEKLREMTNLVIVGGEIDPAKSKDREEVKEIEKMHSFIKQYNLHNHFRWIRSQTNRVQNGELYRYIADAGGV FVQPALYEGFGLTVVEAMTCGLPTFATMHGGPAEIIVNGISGFHIDPYHPEGVAEVLVSFFEK |
Full Sequence |
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Protein Sequence Length: 946 Download |
MEYPSRGHPT PQHHLPSTNS RLPLACIVTF AADSKRRVLI GHFESIISCC DRLRCSLADG 60 HHNSCQSHCL CRRKRNGGKR SGTKEARLTT LEQYSGTSAK CGARAPERHH RPSLPKLQAY 120 GCQDSCPRYV KQGRTHLQPH HIVDELNSLT EADRVTEIKD SAFGLLLLNC QEAIVLPPWL 180 GLAVRPRPGI WEYLRINVEE LILEELSVSE YLGFKEQLAN STDVRDPFLL ELDMAPFNSN 240 FPRMTRPSSI GHGVEFLNRH LSLKLFQTAD GIEPLFQFLR MHTYRGQTLM LNDRITSLRR 300 LRPQLVKADD ILSKLPEDTP FTDFAHKLQE LGLEKGWGNT AGRVVETIKL LEDLLQAPDP 360 DTLEKFLARI PMVFSVVIVT PHGYFGQDGV LGLPDTGGQV VYILDQVRAL ENEMLENLQL 420 QGLDIVPKIV ILTRLIPNAF GTTCNQRIEK VHGSRFSHIL RIPFRNDGQI LKNWISRFDV 480 YPYLETYAQE AASEICADLS GPPDLIIGNY TDGNLVATLL CQHLGVTQCT IAHALEKTKY 540 PDSDIYWKNF EEKYHFSCQF TADLIAMNHA DFIITSTYQE IAGSAKTVGQ YESHQAFTMP 600 SLYRVVNGID VFDPKFNIVS PGADMTVYYP FTDKQHRLTK LHPAIEKLLF SSDQTDEHVG 660 IIDKDKPILF TMARLDRVKN LTGLVELYGK NEKLREMTNL VIVGGEIDPA KSKDREEVKE 720 IEKMHSFIKQ YNLHNHFRWI RSQTNRVQNG ELYRYIADAG GVFVQPALYE GFGLTVVEAM 780 TCGLPTFATM HGGPAEIIVN GISGFHIDPY HPEGVAEVLV SFFEKVKTDP GVWTRISEAA 840 LQRIYSNFTW KLYAERLMTL THVYGFWKYV SNLQRRESKR YLEMFYTLKY RELVKTVPLS 900 SDNESPEEKT DKKAHMGPPT DAALVGVPLA AGEITKAILE STAIH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 2.0e-62 | 376 | 856 | 492 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-122 | 376 | 859 | 484 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 128 | 908 | 783 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 128 | 899 | 775 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 128 | 651 | 525 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001757551.1 | 0 | 124 | 931 | 30 | 880 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001767409.1 | 0 | 137 | 914 | 47 | 825 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001770029.1 | 0 | 124 | 898 | 36 | 810 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781447.1 | 0 | 129 | 938 | 36 | 839 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002271896.1 | 0 | 128 | 904 | 33 | 810 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 128 | 903 | 35 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_G | 0 | 128 | 903 | 35 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_F | 0 | 128 | 903 | 35 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_E | 0 | 128 | 903 | 35 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3s29_D | 0 | 128 | 903 | 35 | 808 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 782 | 128 | 908 | 0 |
BU103683 | 774 | 133 | 904 | 0 |
CX109054 | 583 | 214 | 795 | 0 |
FG227316 | 454 | 373 | 825 | 0 |
HO530266 | 478 | 427 | 899 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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