Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s129_155V6.1 |
Family | CE8 |
Protein Properties | Length: 323 Molecular Weight: 36228.3 Isoelectric Point: 8.0032 |
Chromosome | Chromosome/Scaffold: 129 Start: 903107 End: 905082 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 11 | 300 | 0 |
RVAQDGSGHFRTVQAAIDSLPLPNNKRVVIWVAPGVYRQPVYVPKQKKLITIRGEDAHKTILTWANTATSIQHDLSSQVIGTGTFACGTVIVEGEDFIAQ NITFENAAPKGSGQAVAIRVTADRCAFYECRFLGWQDTAYLHYGRQYFRNCYIEGSVDFIFGNAQVLLEYCHIHCKSDGFITAQSCKSPDEPTGYVFLRC VITGTGTRPYMHLGRPWQPCARVIFAFTFMDGCIVPAGWNNWNDKEKERTACFYEFRCTGPGSDVTQRVPWMRKLTDAEAARFLSVDFID |
Full Sequence |
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Protein Sequence Length: 323 Download |
MQDLPRDGSL RVAQDGSGHF RTVQAAIDSL PLPNNKRVVI WVAPGVYRQP VYVPKQKKLI 60 TIRGEDAHKT ILTWANTATS IQHDLSSQVI GTGTFACGTV IVEGEDFIAQ NITFENAAPK 120 GSGQAVAIRV TADRCAFYEC RFLGWQDTAY LHYGRQYFRN CYIEGSVDFI FGNAQVLLEY 180 CHIHCKSDGF ITAQSCKSPD EPTGYVFLRC VITGTGTRPY MHLGRPWQPC ARVIFAFTFM 240 DGCIVPAGWN NWNDKEKERT ACFYEFRCTG PGSDVTQRVP WMRKLTDAEA ARFLSVDFID 300 QQRTWLTRSP LKAPYIPEPI SA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 2.0e-91 | 12 | 300 | 303 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 1.0e-96 | 10 | 310 | 309 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-100 | 10 | 306 | 299 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-111 | 16 | 307 | 299 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 4 | 317 | 317 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_566842.1 | 0 | 10 | 315 | 7 | 315 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_001770774.1 | 0 | 1 | 322 | 1 | 322 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002283941.1 | 0 | 10 | 315 | 6 | 314 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 10 | 315 | 6 | 314 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 10 | 315 | 6 | 314 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 12 | 306 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 12 | 306 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 8e-25 | 11 | 293 | 10 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 8e-25 | 11 | 293 | 10 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 8e-25 | 11 | 293 | 10 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DC903864 | 257 | 1 | 257 | 0 |
FC359676 | 250 | 13 | 262 | 0 |
FE518131 | 273 | 10 | 281 | 0 |
DC936634 | 202 | 1 | 202 | 0 |
DR686563 | 284 | 12 | 295 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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