Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s12_143V6.1 |
Family | AA5 |
Protein Properties | Length: 543 Molecular Weight: 59852.7 Isoelectric Point: 9.3981 |
Chromosome | Chromosome/Scaffold: 12 Start: 877589 End: 879217 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 30 | 541 | 0 |
SWQVIVENAGVCAMQATLMRSNRVVFFDRTNFGASNITYQDGYCRENPKDMRSKRDCTAHSVAVDLATNKITTLKIFTDTWCSSGSHKADGTLLQTGGWA DGADVTRTIGPGPKDDWIEYPNAPSALLTSRWYSSNHILPDNRVIIVGGRRAFSFEFQPRTKGEGLYSLPFLRDTLTPGSEHNLYPFVNLCPDGNLFIFA NQDSILLDYKANKVLRKYPRIPEGPRNYPASAAAALLPLTAADGYGRAEILICGGAKPEAFSNTGKGIFDEALSSCARMVLTDAAAKWRLVYMPIPRIMG DMLILPTAEVLIINGARKGTAGWQVAREPVLTPVTYDIYRDRFFTWRASTIPRLYHSVALMLPDGKVFVAGSNTNRGYEFSNVQYPTELRIEKYSPYYIA KSYDTRRPKIVSSPTVVKCATSFRIAFEISQNPVALKYHLYAPPFTTHTYSMNQRMLVLKANPVVSDPAKRTSFSATLYAPPNTVIAPAGYYLLTVINQG TPSPSVWVRITA |
Full Sequence |
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Protein Sequence Length: 543 Download |
MAVSKRGFLC VIVVLSICGG YCVNAGPPDS WQVIVENAGV CAMQATLMRS NRVVFFDRTN 60 FGASNITYQD GYCRENPKDM RSKRDCTAHS VAVDLATNKI TTLKIFTDTW CSSGSHKADG 120 TLLQTGGWAD GADVTRTIGP GPKDDWIEYP NAPSALLTSR WYSSNHILPD NRVIIVGGRR 180 AFSFEFQPRT KGEGLYSLPF LRDTLTPGSE HNLYPFVNLC PDGNLFIFAN QDSILLDYKA 240 NKVLRKYPRI PEGPRNYPAS AAAALLPLTA ADGYGRAEIL ICGGAKPEAF SNTGKGIFDE 300 ALSSCARMVL TDAAAKWRLV YMPIPRIMGD MLILPTAEVL IINGARKGTA GWQVAREPVL 360 TPVTYDIYRD RFFTWRASTI PRLYHSVALM LPDGKVFVAG SNTNRGYEFS NVQYPTELRI 420 EKYSPYYIAK SYDTRRPKIV SSPTVVKCAT SFRIAFEISQ NPVALKYHLY APPFTTHTYS 480 MNQRMLVLKA NPVVSDPAKR TSFSATLYAP PNTVIAPAGY YLLTVINQGT PSPSVWVRIT 540 AA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 5.0e-20 | 436 | 539 | 105 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-24 | 436 | 539 | 105 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 1.0e-93 | 43 | 284 | 247 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001754066.1 | 0 | 43 | 542 | 1 | 500 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001757263.1 | 0 | 11 | 539 | 11 | 539 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771865.1 | 0 | 47 | 539 | 3 | 491 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002280559.1 | 0 | 30 | 539 | 39 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002510488.1 | 0 | 31 | 539 | 33 | 546 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eic_A | 0.00000000000007 | 108 | 540 | 225 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2wq8_A | 0.0000000000001 | 108 | 540 | 247 | 660 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eib_A | 0.0000000000002 | 108 | 540 | 225 | 638 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eid_A | 0.0000000000002 | 108 | 540 | 225 | 638 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2vz3_A | 0.0000000000003 | 108 | 540 | 225 | 638 | A Chain A, Galactose Oxidase W290g Mutant |