| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s12_194V6.1 |
| Family | GT33 |
| Protein Properties | Length: 534 Molecular Weight: 59425.4 Isoelectric Point: 6.9937 |
| Chromosome | Chromosome/Scaffold: 12 Start: 1165123 End: 1170782 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT33 | 36 | 522 | 0 |
| RRAAVVVLGDLGRSPRMQYHALSLARQAGLHVDVVALAGTEPHAGLLQHPYIHLHLMRAPFPQGLPRILYLLLLPVKLMIQFLTLVWFLCFQIPAPDFYL VQNPPSIPTLSVVRIACWLRQAAFIIDWHNFGYTILALSFSPRHLLVRLHTWYEKLNGKTADGYLCVTKAMQHELEQNWGIRATVVYDRSPEFFRPITLK EKHELFCRLNAAFTQPPGGMRDCCCDGVLEVPTLANKDGYADSGEGPSVRVERSLFTVHTTAGDIDGEISGGDHCSYEEGRPALIVSSTSWTKDEDFGIL LEAAVMYDRRVAALLGESDSASFNQTSDTYSYSRKPSPFPRLLIVVTGKGPMRAIYEERISKLRLQRVAIRTMWLSAEEYPLLLGAADLGVCLHTSSSGL DLPMKVVDMFGCGLPVCAVSYSCIDELVVNRHNGLLFSSSSELADHLLDLFKGFPDACNLLDTLRRGASESGSSSRWDDEWGEHVLP | |||
| Full Sequence |
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| Protein Sequence Length: 534 Download |
| MTDSNAPPMA VASELHQRSQ SGPLQMSRRR RKEKRRRAAV VVLGDLGRSP RMQYHALSLA 60 RQAGLHVDVV ALAGTEPHAG LLQHPYIHLH LMRAPFPQGL PRILYLLLLP VKLMIQFLTL 120 VWFLCFQIPA PDFYLVQNPP SIPTLSVVRI ACWLRQAAFI IDWHNFGYTI LALSFSPRHL 180 LVRLHTWYEK LNGKTADGYL CVTKAMQHEL EQNWGIRATV VYDRSPEFFR PITLKEKHEL 240 FCRLNAAFTQ PPGGMRDCCC DGVLEVPTLA NKDGYADSGE GPSVRVERSL FTVHTTAGDI 300 DGEISGGDHC SYEEGRPALI VSSTSWTKDE DFGILLEAAV MYDRRVAALL GESDSASFNQ 360 TSDTYSYSRK PSPFPRLLIV VTGKGPMRAI YEERISKLRL QRVAIRTMWL SAEEYPLLLG 420 AADLGVCLHT SSSGLDLPMK VVDMFGCGLP VCAVSYSCID ELVVNRHNGL LFSSSSELAD 480 HLLDLFKGFP DACNLLDTLR RGASESGSSS RWDDEWGEHV LPLLTQVTEG MIS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0438 | RfaG | 9.0e-9 | 369 | 487 | 122 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| TIGR00032 | argG | 1.0e-9 | 376 | 487 | 113 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| PLN02275 | PLN02275 | 4.0e-107 | 310 | 486 | 177 | + transferase, transferring glycosyl groups | ||
| PLN02275 | PLN02275 | 2.0e-107 | 38 | 234 | 198 | + transferase, transferring glycosyl groups | ||
| cd03816 | GT1_ALG1_like | 0 | 38 | 499 | 464 | + This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI19390.1 | 0 | 26 | 527 | 1 | 478 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_001754188.1 | 0 | 34 | 526 | 1 | 455 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002283369.1 | 0 | 14 | 528 | 104 | 594 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330745.1 | 0 | 34 | 528 | 3 | 469 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002465752.1 | 0 | 33 | 527 | 6 | 469 | hypothetical protein SORBIDRAFT_01g045200 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| dolichyl-diphosphooligosaccharide biosynthesis | 2.4.1.142-RXN | EC-2.4.1.142 | chitobiosyldiphosphodolichol β-mannosyltransferase |
