Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s12_287V6.1 |
Family | CBM43 |
Protein Properties | Length: 178 Molecular Weight: 18596.7 Isoelectric Point: 6.7587 |
Chromosome | Chromosome/Scaffold: 12 Start: 1813646 End: 1815738 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 45 | 131 | 1.7e-33 |
WCIAKPNLQDANYQGALDWACGPLSGQGQVNCGPIQPGQSCYLPNTYQSHASWAFNAYYQTHGQTAQACDFQGTAVISTTDPSTSTC |
Full Sequence |
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Protein Sequence Length: 178 Download |
MSHVVAVAAL FLVSHCLLGV GGVGVPMQDL SLDRSHGRRL ATQQWCIAKP NLQDANYQGA 60 LDWACGPLSG QGQVNCGPIQ PGQSCYLPNT YQSHASWAFN AYYQTHGQTA QACDFQGTAV 120 ISTTDPSTST CPYTASNGTT SAGINSTSGA VSDYSTHTRS LPFISALVSV ISFFIAT* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-21 | 44 | 120 | 82 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-37 | 44 | 133 | 90 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO42272.1 | 4e-27 | 43 | 175 | 200 | 331 | unknown protein [Arabidopsis thaliana] |
Swiss-Prot | O65399 | 4e-27 | 43 | 175 | 270 | 401 | E131_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 1; AltName: Full=(1- |
RefSeq | XP_001754106.1 | 0 | 45 | 127 | 1 | 83 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771005.1 | 7e-31 | 45 | 127 | 5 | 87 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781380.1 | 1e-28 | 45 | 127 | 1 | 83 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-18 | 41 | 131 | 9 | 94 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |