| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s134_55V6.1 |
| Family | GH116 |
| Protein Properties | Length: 1119 Molecular Weight: 123574 Isoelectric Point: 5.3081 |
| Chromosome | Chromosome/Scaffold: 134 Start: 434796 End: 445828 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 676 | 1036 | 0 |
| GQFLYLEGIEYIMWNTYDVHFYASFALLALFPKLELAIQRDVAAATLSQNPEKVKYMADGGVGIRKVFGAVPHDLGQHDPWVEVNAYNIHDTSHWKDLNP KFVLQVYRDVVATGDRQFAKAVWPAVYAAMAYMDQFDRDRDGLIENDGFPDQTYDTWSVHGVSAYCGGLWIAALQAAAAMADLVDDKDAATYFKGKFNQA RDVYERKLWNGEYFNYDSGTSSNSNSVQADQLAGQWYAWASGLPPLFDDYKARSALQKVFDFNVMKVKGGKWGAANGMHPNGKVDETCMQSREIWTGVTY AASAAMIHEGMVEQAFTAAQGVFLAGWSDLGYWFQTPEAWTIDGYFRSLAYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 1119 Download |
| MSSPGGVPGG SPRAIPGGIS SPRAIRSNTF HGRRPSWPLA EYVHKPTLAM LDHDPGAPSA 60 LAWRRKLNSH ADFLTEFRVT FMEAVRMITL GMRMWFYVKS ERAQGRAPPI DPFNRETKPS 120 ACHGVPCGGM GGGSIGRGFR GDFRRWQLIP GVCEEAPVLA DQFSVFVKRD KGNGVVKKDA 180 SVLYPGRPQE LSDTKDDTSV SSWDWNLDGQ NSTYHALFPR AWTIYEGEPD PDLKISCRQV 240 SPFIPHNYEE SSFPCCVFSY VVMNTGKQAA DVTLLFTWAN SIGGNSATTG GHFNEPFEEE 300 GGVSGVRLHH KTGAKGGRPV TFAIAAKEMR DVTLTTCPCF SLGGKEVEVT AKDMWTEVKE 360 NGSFDKENWN FKPSAPTRQG SAIGAAIAAR VEVPPGEKRD VVFSLAWDSP EVKFLKGKSY 420 HRRYTSFYGT AGDAASKLTR DALRDYRKWE IAIEDWQQPV LKDEKLPEWY RVTLFNELYY 480 LVAGGTIWTD GLPALQGPSE LSTVTSVHTS APCSPSKEEI SSATSLEVPF PLDLLKVGEG 540 IDVYSASSGP DLSTVRENDQ EGEDTGLNTD VAPSADFNPF LQGLGDEEVQ YISELEHVAG 600 FPTSESLFSL RDKAELELAA SQETERLQSG ETADQMQTET LEHLILKQMQ TAMLGSSEAG 660 IATGPSLLQE GEENVGQFLY LEGIEYIMWN TYDVHFYASF ALLALFPKLE LAIQRDVAAA 720 TLSQNPEKVK YMADGGVGIR KVFGAVPHDL GQHDPWVEVN AYNIHDTSHW KDLNPKFVLQ 780 VYRDVVATGD RQFAKAVWPA VYAAMAYMDQ FDRDRDGLIE NDGFPDQTYD TWSVHGVSAY 840 CGGLWIAALQ AAAAMADLVD DKDAATYFKG KFNQARDVYE RKLWNGEYFN YDSGTSSNSN 900 SVQADQLAGQ WYAWASGLPP LFDDYKARSA LQKVFDFNVM KVKGGKWGAA NGMHPNGKVD 960 ETCMQSREIW TGVTYAASAA MIHEGMVEQA FTAAQGVFLA GWSDLGYWFQ TPEAWTIDGY 1020 FRSLAYMRPL AIWAMQWALY PPKSIAEAPR VPSMDRGSAL VTHDRFSSLA NALRSTSLPQ 1080 LRKTHDPAGF VLHIILLGGV VLSTILWLKY GPYKSKHL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 2.0e-23 | 196 | 490 | 302 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 3.0e-56 | 158 | 449 | 299 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 2.0e-71 | 675 | 1039 | 385 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 3.0e-157 | 676 | 1037 | 366 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG16864.1 | 0 | 665 | 1056 | 15 | 409 | AC069145_13 unknown protein [Oryza sativa Japonica Group] |
| RefSeq | XP_001759997.1 | 0 | 1 | 618 | 1 | 581 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001759997.1 | 0 | 645 | 1082 | 513 | 949 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001771187.1 | 0 | 1 | 492 | 1 | 479 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001771187.1 | 0 | 614 | 1118 | 477 | 981 | predicted protein [Physcomitrella patens subsp. patens] |
