| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s136_116V6.1 |
| Family | AA1 |
| Protein Properties | Length: 590 Molecular Weight: 66174.6 Isoelectric Point: 6.0518 |
| Chromosome | Chromosome/Scaffold: 136 Start: 715462 End: 718947 |
| Description | SKU5 similar 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 73 | 540 | 0 |
| QVIVINGELPGPTIVAKTNDVVEVNVFNRLDEPILFTWDGIQHRHNSWQDGVSGTNCEIPSHWNWTYKFQVKDQIGSFFYFPSTRFQRAAGGYGGIRIDS PRVPSPFVEPLVDVFVLIGDWYTRSHKDLRQTLEDGDLIGRPDGVLINGFGPYSRVDSTRCWVLPVERGQTYRLRISNVGVKTTLNFRIQGHEMTLVETE GSYTQQKSLNNLDVHVGQSYSVIVTADQASRDYYIMASPRFENATTFYDAAGVALMHYSDSNVIASGPHPLGPDPDDISFSLEQARSITWNLTAGAARPN PQGSFHYGSIDPSQTFIFKNSGPAIDGHHRFAINNISFVPTTTPLKLADFYNISSGVYTLDAWPSIYSQQEIMPIFEPTLATAVVSGQYKAFVEMVFENN EATLQSWHLDGYAFWVVGMDHGRWSPTSRSQYNNVDAVARCTTQVFPQSWTAVMVMLDNVGVWNLRSE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 590 Download |
| MASLHNHVNC ERRKSLTKSE FLASWPIVLW IATMMATSVV CALPELISPG DPDIVLVWNV 60 SYITKSPLGK PQQVIVINGE LPGPTIVAKT NDVVEVNVFN RLDEPILFTW DGIQHRHNSW 120 QDGVSGTNCE IPSHWNWTYK FQVKDQIGSF FYFPSTRFQR AAGGYGGIRI DSPRVPSPFV 180 EPLVDVFVLI GDWYTRSHKD LRQTLEDGDL IGRPDGVLIN GFGPYSRVDS TRCWVLPVER 240 GQTYRLRISN VGVKTTLNFR IQGHEMTLVE TEGSYTQQKS LNNLDVHVGQ SYSVIVTADQ 300 ASRDYYIMAS PRFENATTFY DAAGVALMHY SDSNVIASGP HPLGPDPDDI SFSLEQARSI 360 TWNLTAGAAR PNPQGSFHYG SIDPSQTFIF KNSGPAIDGH HRFAINNISF VPTTTPLKLA 420 DFYNISSGVY TLDAWPSIYS QQEIMPIFEP TLATAVVSGQ YKAFVEMVFE NNEATLQSWH 480 LDGYAFWVVG MDHGRWSPTS RSQYNNVDAV ARCTTQVFPQ SWTAVMVMLD NVGVWNLRSE 540 NLQRQYLGQE LYLRVVNPEV LPMHSPYSET PIPDNALHCG WLSYKQKAQ* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02354 | PLN02354 | 0 | 32 | 580 | 553 | + copper ion binding / oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 46 | 580 | 536 | + oxidoreductase | ||
| PLN00044 | PLN00044 | 0 | 44 | 589 | 563 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02168 | PLN02168 | 0 | 58 | 580 | 533 | + copper ion binding / pectinesterase | ||
| PLN02991 | PLN02991 | 0 | 31 | 580 | 554 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACN40384.1 | 0 | 50 | 589 | 23 | 558 | unknown [Picea sitchensis] |
| EMBL | CBI35585.1 | 0 | 51 | 587 | 27 | 559 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001151974.1 | 0 | 58 | 589 | 13 | 543 | LOC100285611 [Zea mays] |
| RefSeq | XP_001771342.1 | 0 | 35 | 589 | 1 | 554 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002321241.1 | 0 | 31 | 587 | 4 | 554 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 58 | 580 | 8 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asq_A | 0 | 58 | 580 | 8 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_B | 0 | 58 | 580 | 8 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1asp_A | 0 | 58 | 580 | 8 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
| PDB | 1aso_B | 0 | 58 | 580 | 8 | 539 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
