y
Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s138_14V6.1 |
Family | GH1 |
Protein Properties | Length: 539 Molecular Weight: 59972.6 Isoelectric Point: 5.7809 |
Chromosome | Chromosome/Scaffold: 138 Start: 81178 End: 85003 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 66 | 536 | 0 |
SLFPEGFVFGTATSSYQVEGAANVSGREPSIWDTFSRIPGKISDGKTGDVASDQYDKYMGDIDLMSQLNVDAYRFSISWTRVMKLGGETPEVNQEGVAYY NNLINGLLKKGIQPFVTLYHWDLPQSLNDAYGGWIDRKVVNDYAQFAEACFTAFGDRVKHWITFNEPQTFTVLGYGNGIHAPGRCSDRSKCTAGNTATEP YLAAHNVLLAHAAAVDVYKRKFKAMQGGAVGISLDCEWGEPETNSAADVEAAERHVLFQLGWFLDPIYRGDYPAVMRTNVGNRLPEFTADELALLKGSLD FIGLNHYTSRFISSGSGPGNALTSDHWQDQGILSSVTSRNGSQIGHQAASEWLYIVPWGIGKTLVWLTERYQKPLIFVTENGMDDLDGSKPVPELLNDVN RIDFYENYLSSVLSAIGNGSDVRGYFAWSLMDNFEWSMGYTRRFGLLYVDYDNQQRSLKESAKWFSRFLTR |
Full Sequence |
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Protein Sequence Length: 539 Download |
MTTRSAFGYA LQVTGFILLG VPILVLFLQL PRAITPHRID PSVLPCKLHQ DAELSNASTC 60 VPFHRSLFPE GFVFGTATSS YQVEGAANVS GREPSIWDTF SRIPGKISDG KTGDVASDQY 120 DKYMGDIDLM SQLNVDAYRF SISWTRVMKL GGETPEVNQE GVAYYNNLIN GLLKKGIQPF 180 VTLYHWDLPQ SLNDAYGGWI DRKVVNDYAQ FAEACFTAFG DRVKHWITFN EPQTFTVLGY 240 GNGIHAPGRC SDRSKCTAGN TATEPYLAAH NVLLAHAAAV DVYKRKFKAM QGGAVGISLD 300 CEWGEPETNS AADVEAAERH VLFQLGWFLD PIYRGDYPAV MRTNVGNRLP EFTADELALL 360 KGSLDFIGLN HYTSRFISSG SGPGNALTSD HWQDQGILSS VTSRNGSQIG HQAASEWLYI 420 VPWGIGKTLV WLTERYQKPL IFVTENGMDD LDGSKPVPEL LNDVNRIDFY ENYLSSVLSA 480 IGNGSDVRGY FAWSLMDNFE WSMGYTRRFG LLYVDYDNQQ RSLKESAKWF SRFLTRAK* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 4.0e-126 | 54 | 534 | 491 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-129 | 63 | 534 | 478 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-139 | 68 | 530 | 471 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 1.0e-168 | 69 | 530 | 464 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 6.0e-177 | 68 | 536 | 473 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN41025.1 | 0 | 41 | 536 | 3 | 494 | unknown [Picea sitchensis] |
RefSeq | XP_001765414.1 | 0 | 52 | 536 | 3 | 490 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001769105.1 | 0 | 34 | 537 | 31 | 534 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771505.1 | 0 | 1 | 538 | 1 | 538 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002465651.1 | 0 | 65 | 537 | 32 | 508 | hypothetical protein SORBIDRAFT_01g043030 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 65 | 534 | 14 | 486 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3gnp_A | 0 | 65 | 534 | 14 | 486 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3gno_A | 0 | 65 | 534 | 14 | 486 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_B | 0 | 56 | 536 | 22 | 505 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 3ptq_A | 0 | 56 | 536 | 22 | 505 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |