| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s138_41V6.1 |
| Family | GT51 |
| Protein Properties | Length: 657 Molecular Weight: 73117.3 Isoelectric Point: 8.2447 |
| Chromosome | Chromosome/Scaffold: 138 Start: 199599 End: 206971 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT51 | 2 | 89 | 3.6e-31 |
| EMILAILLERQMSKWDILHHYLNKIYWGHGVYGIEGAAALYFGKHPSVLTLGECAMLAGIIPAPEYLSPYRDPSRGKKPQARTLRRMV | |||
| Full Sequence |
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| Protein Sequence Length: 657 Download |
| MEMILAILLE RQMSKWDILH HYLNKIYWGH GVYGIEGAAA LYFGKHPSVL TLGECAMLAG 60 IIPAPEYLSP YRDPSRGKKP QARTLRRMVE AGFLDAATAA AAVNEPLRLG LEGDDGSSGP 120 WRAPYFVSEV LYELYQKYGR DEVLQGGFQV HTTVDLAMQE VAEKAVNDAG IEYDDERIVL 180 AQKAVERCVE ALGILGQARE QKMEQAALVA ATKAREQFQK LSKIESSKGK ETSEEERSKA 240 EELAVSEAAN KASEAVKRRF DLTEEALSAS LAEHQEEVKK ASKARSQGAV VAIDPVRGAV 300 RVLVGGRDYY ESNFNRATQA YRPPGSTFKP IVYLAALAEG IERNHVIVDE PYSVGDFSPE 360 NYDKKFRGQV TLEESLLRSL NVPTVKLCAA IGVDKVCRMG KALGIDSYLP HELSLSLGGC 420 EMTPLQLATA YSTIASGGVL HKPYLISRVE NYQGRVIEEV KPISTEHRET VVDEYAVSEL 480 RSLLQAVVDR GTGRAARIGR PCAGKTGTSD GHRDAWFAGF TPMLSCVVWL GYDDNTPLGG 540 IWPGLRPTMR SLLGVPFEKF HDVGRDEFGG RAPRRIRKKS RRPRIVGLPE IRKHYRRHDK 600 KVLWRDVWDW EKASSAWEER ERMQEWTADR AKRAEEIKTM KEQLQKALAK TGITPS* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0744 | MrcB | 3.0e-42 | 2 | 167 | 166 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
| TIGR02074 | PBP_1a_fam | 1.0e-47 | 2 | 184 | 183 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG0744 | MrcB | 1.0e-79 | 194 | 540 | 362 | + Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane] | ||
| TIGR02074 | PBP_1a_fam | 6.0e-89 | 264 | 539 | 280 | + penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]. | ||
| COG5009 | MrcA | 1.0e-120 | 2 | 539 | 586 | + Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008658 | penicillin binding |
| GO:0009252 | peptidoglycan biosynthetic process |
| GO:0009273 | peptidoglycan-based cell wall biogenesis |
| GO:0009274 | peptidoglycan-based cell wall |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE45868.1 | 0 | 1 | 656 | 271 | 936 | penicillin-binding protein [Physcomitrella patens] |
| RefSeq | NP_954174.1 | 0 | 2 | 577 | 140 | 763 | 1A family penicillin-binding protein [Geobacter sulfurreducens PCA] |
| RefSeq | XP_001771453.1 | 0 | 1 | 656 | 271 | 900 | penicillin-binding protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_846789.1 | 0 | 2 | 539 | 159 | 696 | 1A family penicillin-binding protein [Syntrophobacter fumaroxidans MPOB] |
| RefSeq | ZP_01312735.1 | 0 | 2 | 539 | 147 | 717 | Penicillin-binding protein 1A [Desulfuromonas acetoxidans DSM 684] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ue1_B | 0 | 2 | 539 | 116 | 695 | A Chain A, Lactobacillus Reuteri N-Terminally Truncated Glucansucrase Gtf180(D1025n)-Sucrose Complex |
| PDB | 3ue1_A | 0 | 2 | 539 | 116 | 695 | A Chain A, Lactobacillus Reuteri N-Terminally Truncated Glucansucrase Gtf180(D1025n)-Sucrose Complex |
| PDB | 3ue0_B | 0 | 2 | 539 | 116 | 695 | A Chain A, Lactobacillus Reuteri N-Terminally Truncated Glucansucrase Gtf180(D1025n)-Sucrose Complex |
| PDB | 3ue0_A | 0 | 2 | 539 | 116 | 695 | A Chain A, Lactobacillus Reuteri N-Terminally Truncated Glucansucrase Gtf180(D1025n)-Sucrose Complex |
| PDB | 3udx_B | 0 | 2 | 539 | 116 | 695 | A Chain A, Lactobacillus Reuteri N-Terminally Truncated Glucansucrase Gtf180(D1025n)-Sucrose Complex |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FC349419 | 230 | 438 | 657 | 0 |
| FC361339 | 225 | 123 | 347 | 0 |
| FE509195 | 175 | 369 | 543 | 0 |
| BJ596965 | 148 | 520 | 657 | 0 |
| FE509195 | 32 | 344 | 375 | 0.02 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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