| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s149_266V6.1 |
| Family | GH35 |
| Protein Properties | Length: 691 Molecular Weight: 76714.3 Isoelectric Point: 6.3335 |
| Chromosome | Chromosome/Scaffold: 149 Start: 873337 End: 879247 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 61 | 384 | 0 |
| FLKDGIPFRILGGELHYFRVHPQLWEDRLLRVKSLGLNTIQTYVPWNLHEPRPGHLNFNGSADLLSFLKLAHRLDLLVMLRIGPYMCGEWDLGGLPAWLL ELKPSVRLRSSDAQYLARVDNWWKELLPMVAPELFLAGGPVIMVQIENEYGTYGSDKLYLKFLQSQARLHLGDDIIIYTTDGAVEENIRDGSLPEAGVLA AINFQTGSDPASAFALQKRHNPPGMSPPLATEFYTGWLSHWGEKLAKTDAKSTAEALDNILRLNASVVLYMVHGGTNFGFFSGANTGTGPSDFQPDITSY DYDAPIGEAGDVGGVKYQEIRNVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 691 Download |
| MRRIPEQYFN FCCSLRSVMA MFLERMEFKV VLLAMLLPCL WTSVMAGSTS NHSFVIENDL 60 FLKDGIPFRI LGGELHYFRV HPQLWEDRLL RVKSLGLNTI QTYVPWNLHE PRPGHLNFNG 120 SADLLSFLKL AHRLDLLVML RIGPYMCGEW DLGGLPAWLL ELKPSVRLRS SDAQYLARVD 180 NWWKELLPMV APELFLAGGP VIMVQIENEY GTYGSDKLYL KFLQSQARLH LGDDIIIYTT 240 DGAVEENIRD GSLPEAGVLA AINFQTGSDP ASAFALQKRH NPPGMSPPLA TEFYTGWLSH 300 WGEKLAKTDA KSTAEALDNI LRLNASVVLY MVHGGTNFGF FSGANTGTGP SDFQPDITSY 360 DYDAPIGEAG DVGGVKYQEI RNVLSKYAAG RLPDPPPLPQ RTAYGEVTMK AMGSLFDVLK 420 VVSTPPGGMK LEWPMPMEQL RQGSGFILYR SYLPAYARPG SRLSVVEVYD RAQVFVGSAT 480 NNRIFLGTLE RWSRNTLTLP ASASVSGLQL DILVENMGRV NYGLFIGENK GITEAVLLDD 540 YPILGWSVHT IGLDSVGGLK PSAFQKTIPP HFELDEIITT KIKRTPQLVR PFVDLVNGPV 600 FYEGTLNVTQ PSDTFMSLRG WNKGVAFING FNLGRFWPSM GPQCTLYIPG PLLQPGQNKL 660 ILLELESSSP VQTIDFTHTA DFTCGIQMRA * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 0.0002 | 83 | 216 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 3.0e-29 | 59 | 658 | 651 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 5.0e-43 | 28 | 383 | 366 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-145 | 61 | 387 | 327 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI35958.1 | 0 | 52 | 684 | 73 | 700 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001056172.1 | 0 | 42 | 685 | 22 | 672 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_001762114.1 | 0 | 34 | 685 | 3 | 650 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772404.1 | 0 | 54 | 690 | 1 | 615 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002280228.1 | 0 | 52 | 684 | 49 | 676 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 59 | 666 | 16 | 599 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 3thd_C | 0 | 59 | 666 | 16 | 599 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 3thd_B | 0 | 59 | 666 | 16 | 599 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 3thd_A | 0 | 59 | 666 | 16 | 599 | A Chain A, Crystal Structure Of Human Pofut2 E54a Mutant In Complex With Gdp- Fucose |
| PDB | 3thc_D | 0 | 59 | 666 | 16 | 599 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| FC438149 | 222 | 470 | 691 | 0 |
| HO630917 | 330 | 53 | 381 | 0 |
| DY905780 | 282 | 53 | 334 | 0 |
| DY939729 | 280 | 53 | 332 | 0 |
| HO630917 | 109 | 365 | 473 | 0.00002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |