Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s14_353V6.1 |
Family | CE8 |
Protein Properties | Length: 446 Molecular Weight: 49906 Isoelectric Point: 5.0621 |
Chromosome | Chromosome/Scaffold: 14 Start: 2116530 End: 2119128 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 75 | 384 | 0 |
VVSNDGHPDHFVSVQAAVDAVPMWNYVRWVIFIKPGVYYGPVIVPEGKDYITFLGESAESTILTFNRKACDKKPDGSDYTILDCPTVIVEASNFIAKGIT FENSSPKPGDFDYNSQAPAVRVSGDKCAFYDCIFLGWQDTLYADQGKHYYKDSRIEGNVDFILGYASAVFENCTIHSRGEGFITAQSRWCEDDCQEASNS TFITPNSTFVILRSNITGYDPATYNSTGTGLTYLGRPWREYAKVVFIDTTLGEHIAPEGWVDWVTDSGPLFAHDNVYFGEFNSSGPGASESSRIDWSHQL TPEEAQVYRD |
Full Sequence |
---|
Protein Sequence Length: 446 Download |
MLVLRVGQRR HCRCCMNYVI SFLWVILVIP CVAAAWTRPS TGGDDLRARQ EPLNFAEKTF 60 VDAVDGQDGI QTVLVVSNDG HPDHFVSVQA AVDAVPMWNY VRWVIFIKPG VYYGPVIVPE 120 GKDYITFLGE SAESTILTFN RKACDKKPDG SDYTILDCPT VIVEASNFIA KGITFENSSP 180 KPGDFDYNSQ APAVRVSGDK CAFYDCIFLG WQDTLYADQG KHYYKDSRIE GNVDFILGYA 240 SAVFENCTIH SRGEGFITAQ SRWCEDDCQE ASNSTFITPN STFVILRSNI TGYDPATYNS 300 TGTGLTYLGR PWREYAKVVF IDTTLGEHIA PEGWVDWVTD SGPLFAHDNV YFGEFNSSGP 360 GASESSRIDW SHQLTPEEAQ VYRDVEAFLD TKNWVEHPLS VEQLKGSHLL NEQNWATPAA 420 PQRGYRDKKF PPRRWKRLGA KNGMP* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 2.0e-68 | 76 | 379 | 308 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 7.0e-72 | 71 | 395 | 327 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 8.0e-73 | 73 | 397 | 329 | + pectinesterase family protein | ||
pfam01095 | Pectinesterase | 5.0e-77 | 75 | 382 | 319 | + Pectinesterase. | ||
PLN02773 | PLN02773 | 8.0e-84 | 73 | 380 | 312 | + pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_566842.1 | 0 | 73 | 379 | 6 | 287 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_001754705.1 | 0 | 70 | 382 | 1 | 295 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002283941.1 | 0 | 73 | 404 | 5 | 308 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 73 | 390 | 5 | 296 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 73 | 390 | 5 | 296 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 1.4013e-45 | 74 | 370 | 9 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-38 | 75 | 396 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 2e-25 | 75 | 397 | 34 | 364 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 8e-20 | 77 | 390 | 12 | 336 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 8e-20 | 77 | 390 | 12 | 336 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |