Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s152_86V6.2 |
Family | AA2 |
Protein Properties | Length: 190 Molecular Weight: 20688.6 Isoelectric Point: 6.8542 |
Chromosome | Chromosome/Scaffold: 152 Start: 461584 End: 464086 |
Description | ascorbate peroxidase 1 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA2 | 24 | 188 | 0 |
SGDKNCAPIILRLAWHGSGTYDQESKTGGPLGTIRFGQELAHGANAGLDIAVNLLQPIKEQFPELSYADFYTLAGVVAVEVTGGPTIPFHPGRKDHETCP VEGRLPDATKGLDHLRCVFTKQMGLTDKDIVVLSGAHTLGRCHKDRSGFEGAWTPNPLRFDNSYF |
Full Sequence |
---|
Protein Sequence Length: 190 Download |
MLDVVKFFIA NLCVSCCDLR WRGSGDKNCA PIILRLAWHG SGTYDQESKT GGPLGTIRFG 60 QELAHGANAG LDIAVNLLQP IKEQFPELSY ADFYTLAGVV AVEVTGGPTI PFHPGRKDHE 120 TCPVEGRLPD ATKGLDHLRC VFTKQMGLTD KDIVVLSGAH TLGRCHKDRS GFEGAWTPNP 180 LRFDNSYFQ* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
cd00314 | plant_peroxidase_like | 5.0e-41 | 18 | 188 | 186 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. |
PLN02879 | PLN02879 | 4.0e-90 | 14 | 189 | 177 | + L-ascorbate peroxidase |
PLN02364 | PLN02364 | 5.0e-93 | 14 | 189 | 177 | + L-ascorbate peroxidase 1 |
PLN02608 | PLN02608 | 5.0e-97 | 27 | 189 | 163 | + L-ascorbate peroxidase |
cd00691 | ascorbate_peroxidase | 1.0e-113 | 26 | 188 | 166 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC08576.1 | 0 | 25 | 189 | 28 | 192 | ascorbate peroxidase [Zantedeschia aethiopica] |
GenBank | AAS19934.1 | 0 | 13 | 189 | 15 | 192 | ascorbate peroxidase [Rehmannia glutinosa] |
GenBank | AAY21068.1 | 0 | 13 | 189 | 15 | 192 | cytosolic ascorbate peroxidase [Capsicum annuum] |
RefSeq | XP_001772538.1 | 0 | 25 | 189 | 28 | 192 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001772540.1 | 0 | 23 | 189 | 2 | 168 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1apx_D | 0 | 13 | 188 | 14 | 190 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_C | 0 | 13 | 188 | 14 | 190 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_B | 0 | 13 | 188 | 14 | 190 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_A | 0 | 13 | 188 | 14 | 190 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 2xj6_A | 0 | 13 | 188 | 14 | 190 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
ascorbate glutathione cycle | RXN-3521 | - | L-ascorbate peroxidase |
L-ascorbate degradation III | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
L-ascorbate degradation V | RXN-12440 | EC-1.11.1.11 | L-ascorbate peroxidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
FC414943 | 165 | 25 | 189 | 0 |
FC411522 | 165 | 25 | 189 | 0 |
FC377393 | 165 | 25 | 189 | 0 |
BJ945825 | 165 | 25 | 189 | 0 |
BJ950736 | 165 | 25 | 189 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|