Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s158_189V6.1 |
Family | GT47 |
Protein Properties | Length: 733 Molecular Weight: 84718.3 Isoelectric Point: 5.4459 |
Chromosome | Chromosome/Scaffold: 158 Start: 974090 End: 976288 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 334 | 675 | 0 |
SCDGRRVYTYDLPPSMNIDILKNCSGKLVPWLNFCAHHQNYGFGIAVNTTNNNFRKDWYGTDAYMLEVIFYERMRTYTCRTSNPGEADLFFIPFFSGLEA LPYLYTDGKRRLQQGRELVEWLEANATQTWRRHGGHDHFLIAGRTAWDFCRPLTAVTWWGTSLFSNPEMENTTAMLLERRSWRGDEMAVPYPVGFHPSTS ASLQSWIKLVRSSTRKYLFSFSGALRPQLVFSIREILSQQCTQAGSACSRLDCGKIKCSHEPQPIYTSLLQAKFCLQPRGDTATRRSVIDSIVSGCIPVF FHKDTAFTQYRWHLPNDYDNFSVFIDEEDIKNGKADVKKILE |
Full Sequence |
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Protein Sequence Length: 733 Download |
MYSLLSRKYS KQHHMRKPRC KFMHVCCSVT VLLILITVMC RPMPSAPSTP ESIASMAVGE 60 SLQLNTQSIP AVEVAQETKT EADQSKLLEN EMKEQVQGDS EATRSERREV EQEEGALRSG 120 QEDEEQDQHA EDKHEQRAEN RHAQQAEDEL EQHLEDVHGR HAEVKNKQRV EDEHEKQVED 180 EHEKQVEDEH EKQVEDEHEK QMEDEHEKQM EDEHEKQVDD EHEQRVEDGQ GQQAEDELEQ 240 HLEDVQDQHA EVKHQQRVDD EHEQQVKLDS RSAEHKQAGF PEEHQEGSKP KIKYSKELGA 300 EHGHGIFQSK QSEQEQKVEP EPQLKKHGRE VTISCDGRRV YTYDLPPSMN IDILKNCSGK 360 LVPWLNFCAH HQNYGFGIAV NTTNNNFRKD WYGTDAYMLE VIFYERMRTY TCRTSNPGEA 420 DLFFIPFFSG LEALPYLYTD GKRRLQQGRE LVEWLEANAT QTWRRHGGHD HFLIAGRTAW 480 DFCRPLTAVT WWGTSLFSNP EMENTTAMLL ERRSWRGDEM AVPYPVGFHP STSASLQSWI 540 KLVRSSTRKY LFSFSGALRP QLVFSIREIL SQQCTQAGSA CSRLDCGKIK CSHEPQPIYT 600 SLLQAKFCLQ PRGDTATRRS VIDSIVSGCI PVFFHKDTAF TQYRWHLPND YDNFSVFIDE 660 EDIKNGKADV KKILEGYSAK QVEQMRERLI GIIPNVLYRH PKSKDLSESM RDAFDLTIEG 720 MAQKAIQFKS ST* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR00927 | 2A1904 | 0.0002 | 75 | 305 | 243 | + K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds]. | ||
TIGR00927 | 2A1904 | 4.0e-5 | 137 | 300 | 178 | + K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds]. | ||
TIGR00927 | 2A1904 | 5.0e-6 | 50 | 286 | 246 | + K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds]. | ||
TIGR00927 | 2A1904 | 1.0e-6 | 76 | 278 | 235 | + K+-dependent Na+/Ca+ exchanger. [Transport and binding proteins, Cations and iron carrying compounds]. | ||
pfam03016 | Exostosin | 9.0e-61 | 334 | 677 | 360 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001752641.1 | 0 | 334 | 731 | 6 | 403 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001752721.1 | 0 | 335 | 732 | 100 | 491 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001761213.1 | 0 | 308 | 732 | 9 | 434 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001763405.1 | 0 | 334 | 724 | 2 | 386 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773063.1 | 0 | 335 | 729 | 1 | 395 | predicted protein [Physcomitrella patens subsp. patens] |