Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s163_84V6.1 |
Family | GT31 |
Protein Properties | Length: 483 Molecular Weight: 55183.4 Isoelectric Point: 6.7889 |
Chromosome | Chromosome/Scaffold: 163 Start: 631647 End: 637849 |
Description | Galactosyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 249 | 430 | 0 |
ERMAVRKTWFQSKAIQSSQAVARFFVALHANKDINMQLKKEADYYGDIIILPFIDRYDIVVLKTVEICKFGVQNVTAKYIMKCDDDTFVRIDSVLEEIRT TSISQGLYMGSMNEFHRPLRSGKWAVTAEEWPERIYPIYANGPGYILSEDIVHFIVEMNERGSLQLFKMEDVSVGIWVREYA |
Full Sequence |
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Protein Sequence Length: 483 Download |
MFGSAITLIG KPREAHMEYK PPIARVGEGV SPYVMVSQFL VELQGLKVVK GEDPPRILHL 60 NPRLRGDWSW KPIIEHNTCY RNQWGPAHRC EGWQVPEYEE TVDGLPKCEK WLRDDGKKPA 120 STQKSWWLGR LVGRSDKETL EWEYPLSEGR EFVLTIRAGV EGFHVTIDGR HISSFPYRVG 180 YAVEETTGIL VAGDVDVMSI TVTSLPLTHP SYYPELVLES GDIWKAPPVP ATKIDLFIGI 240 MSSSNHFAER MAVRKTWFQS KAIQSSQAVA RFFVALHANK DINMQLKKEA DYYGDIIILP 300 FIDRYDIVVL KTVEICKFGV QNVTAKYIMK CDDDTFVRID SVLEEIRTTS ISQGLYMGSM 360 NEFHRPLRSG KWAVTAEEWP ERIYPIYANG PGYILSEDIV HFIVEMNERG SLQLFKMEDV 420 SVGIWVREYA KQVKHVQYEH SIRFAQAGCI PKYLTAHYQS PRQMLCLWDK VLAHDDGKCC 480 NL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00070 | GLECT | 4.0e-12 | 3 | 201 | 199 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
smart00908 | Gal-bind_lectin | 3.0e-12 | 38 | 201 | 164 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
pfam00337 | Gal-bind_lectin | 2.0e-16 | 31 | 202 | 172 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 1.0e-26 | 248 | 435 | 196 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 1.0e-122 | 3 | 480 | 484 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA97209.1 | 0 | 2 | 482 | 197 | 680 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_201068.1 | 0 | 2 | 482 | 197 | 680 | galactosyltransferase family protein [Arabidopsis thaliana] |
RefSeq | XP_001773483.1 | 0 | 35 | 482 | 1 | 448 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001778360.1 | 0 | 35 | 482 | 1 | 447 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002268372.1 | 0 | 2 | 482 | 192 | 670 | PREDICTED: hypothetical protein [Vitis vinifera] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC414500 | 269 | 51 | 319 | 0 |
FC342216 | 255 | 88 | 342 | 0 |
BJ940356 | 241 | 38 | 278 | 0 |
HO397826 | 385 | 99 | 481 | 0 |
FC333655 | 228 | 79 | 306 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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