| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s169_88V6.1 |
| Family | GT47 |
| Protein Properties | Length: 528 Molecular Weight: 59843 Isoelectric Point: 8.8312 |
| Chromosome | Chromosome/Scaffold: 169 Start: 464744 End: 466658 |
| Description | exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT47 | 150 | 468 | 0 |
| TLRVFMYDLPSEFHYGMLVQQPYSQGQIWPRNVSDIPPYLGGLYKQHSVEYWLTSDLLTSNMADRQSVCTAFRVDNWRSADVIFVPFFASLSYNKFTRAE QRALGEDKNQELQEKLMQFLEKQPAWQASGGVDHVIVIHHPNSGYFMRDHLRKAMFVVADFGRYASDVANIGKDIVAPYKHVVNDFEAEATISYEKRKTL LFFQGAIMRKEGGIIRLQLYKLLNGEPDVHFEGGNTTNSAIRSASEGMQNSKFCLNLAGDTPSSNRLFDAIASHCVPVIISDDIEVPFEDTLNYSTFSIF IKSSDALKSNFIIDLLRGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MNSSQRINPI YEQLHWGDKV VKRGLLCKES PNQENSGGVS QKGSGSPTFL SLPLNSHDVQ 60 KARPCRGSDE CRTSRRYILA VCLLLSITAF AGSLMFAKSV SPTLLLNDGC TTSYNSFSKL 120 QRRFSLQDSQ TASAELGTGF PEGCSEKATT LRVFMYDLPS EFHYGMLVQQ PYSQGQIWPR 180 NVSDIPPYLG GLYKQHSVEY WLTSDLLTSN MADRQSVCTA FRVDNWRSAD VIFVPFFASL 240 SYNKFTRAEQ RALGEDKNQE LQEKLMQFLE KQPAWQASGG VDHVIVIHHP NSGYFMRDHL 300 RKAMFVVADF GRYASDVANI GKDIVAPYKH VVNDFEAEAT ISYEKRKTLL FFQGAIMRKE 360 GGIIRLQLYK LLNGEPDVHF EGGNTTNSAI RSASEGMQNS KFCLNLAGDT PSSNRLFDAI 420 ASHCVPVIIS DDIEVPFEDT LNYSTFSIFI KSSDALKSNF IIDLLRGVSR EKWTKMWATL 480 KQVEHHFKYQ YPTQPDDAVH MTWKAIARKI HKVRLHLNKE RRYQWRT* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-58 | 151 | 468 | 328 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001758016.1 | 0 | 144 | 523 | 92 | 475 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001759885.1 | 0 | 151 | 523 | 1 | 383 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001761432.1 | 0 | 151 | 523 | 1 | 377 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001773896.1 | 0 | 155 | 527 | 1 | 373 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001782303.1 | 0 | 143 | 523 | 31 | 414 | predicted protein [Physcomitrella patens subsp. patens] |
