PlantCAZyme

Basic Information
Species	Physcomitrella patens
Cazyme ID	Pp1s16_339V6.1
Family	GH30
Protein Properties	Length: 626 Molecular Weight: 70822.4 Isoelectric Point: 6.6772
Chromosome	Chromosome/Scaffold: 16 Start: 2491484 End: 2495106
Description
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH30	159	609	0
DFQDIYVIWDGWGTSLCWWGNFVGGLPKEDFDYVVDLLFDPRKGLGMNIVRYNIGGGADLTIDTNLRPFGDVPGFKAGPNEPYDWTADKRQRAVLFAARD KGANIFEAFNNSPPPWMTFSGSVTGNWKNGQDNLNPKYYEAFADYLTEVVLKYKEWGIQFDTLAPFNEPCEGWWYIDRNKPQQEGCNFSTKSMDKVIPIV KKYLVKKNLPTRLSAFDAWTFNTIRAMRGISEESMEAIDQLNVHTYIFFVNREDDAKRRETNRNIAAKGKKLWMSEYGPLNWNGDEHEVALGVAKHITLD INDLHPSAWCYWQALEGPGSLWGLLQTPLVYGASPISVDLKKQFFVMMHFSRWIRQGFKVYRNEGLRDFLVTAVDPLGTTVIVVFTNTSDTNKDVEYDLS VLAPRLKDSPIHVAPFRTSRTENHAALPVLNYEEPILDIRSLAKSVTTLVI

Full Sequence
Protein Sequence Length: 626 Download
MAACHLPIAS TRQGDSAMWV DHSGLGCNGK VCRFQNILTA TGETSYANRI VSCSSHVGGN 60 QYLQRTILSK NVEDTQLRCR RNATKVFALK PPREPVPLET GQEPDVGSSD EKATKEAEEK 120 KVIKVEKKGL LGQIQNFFAW IGAWPNIPQK EEFVQIPKDF QDIYVIWDGW GTSLCWWGNF 180 VGGLPKEDFD YVVDLLFDPR KGLGMNIVRY NIGGGADLTI DTNLRPFGDV PGFKAGPNEP 240 YDWTADKRQR AVLFAARDKG ANIFEAFNNS PPPWMTFSGS VTGNWKNGQD NLNPKYYEAF 300 ADYLTEVVLK YKEWGIQFDT LAPFNEPCEG WWYIDRNKPQ QEGCNFSTKS MDKVIPIVKK 360 YLVKKNLPTR LSAFDAWTFN TIRAMRGISE ESMEAIDQLN VHTYIFFVNR EDDAKRRETN 420 RNIAAKGKKL WMSEYGPLNW NGDEHEVALG VAKHITLDIN DLHPSAWCYW QALEGPGSLW 480 GLLQTPLVYG ASPISVDLKK QFFVMMHFSR WIRQGFKVYR NEGLRDFLVT AVDPLGTTVI 540 VVFTNTSDTN KDVEYDLSVL APRLKDSPIH VAPFRTSRTE NHAALPVLNY EEPILDIRSL 600 AKSVTTLVIS PLQNDQKDLF DLSSR*

Full Sequence

Protein Sequence Length: 626 Download

MAACHLPIAS TRQGDSAMWV DHSGLGCNGK VCRFQNILTA TGETSYANRI VSCSSHVGGN    60
QYLQRTILSK NVEDTQLRCR RNATKVFALK PPREPVPLET GQEPDVGSSD EKATKEAEEK    120
KVIKVEKKGL LGQIQNFFAW IGAWPNIPQK EEFVQIPKDF QDIYVIWDGW GTSLCWWGNF    180
VGGLPKEDFD YVVDLLFDPR KGLGMNIVRY NIGGGADLTI DTNLRPFGDV PGFKAGPNEP    240
YDWTADKRQR AVLFAARDKG ANIFEAFNNS PPPWMTFSGS VTGNWKNGQD NLNPKYYEAF    300
ADYLTEVVLK YKEWGIQFDT LAPFNEPCEG WWYIDRNKPQ QEGCNFSTKS MDKVIPIVKK    360
YLVKKNLPTR LSAFDAWTFN TIRAMRGISE ESMEAIDQLN VHTYIFFVNR EDDAKRRETN    420
RNIAAKGKKL WMSEYGPLNW NGDEHEVALG VAKHITLDIN DLHPSAWCYW QALEGPGSLW    480
GLLQTPLVYG ASPISVDLKK QFFVMMHFSR WIRQGFKVYR NEGLRDFLVT AVDPLGTTVI    540
VVFTNTSDTN KDVEYDLSVL APRLKDSPIH VAPFRTSRTE NHAALPVLNY EEPILDIRSL    600
AKSVTTLVIS PLQNDQKDLF DLSSR* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam02055	Glyco_hydro_30	7.0e-5	202	547	382	+ O-Glycosyl hydrolase family 30.
COG5520	COG5520	8.0e-8	270	520	254	+ O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane]

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
RefSeq	XP_001755218.1	0	1	625	70	694	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	YP_001611603.1	0	152	609	104	541	hypothetical protein sce0966 [Sorangium cellulosum 'So ce 56']
RefSeq	YP_003012835.1	0	147	612	11	462	hypothetical protein Pjdr2_4120 [Paenibacillus sp. JDR-2]
RefSeq	YP_003250981.1	0	164	609	33	461	O-Glycosyl hydrolase-like protein [Fibrobacter succinogenes subsp. succinogenes S85]
RefSeq	ZP_03475645.1	0	164	610	36	471	hypothetical protein PRABACTJOHN_01307 [Parabacteroides johnsonii DSM 18315]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	3clw_F	0.0000000000004	159	609	11	496	A Chain A, Crystal Structure Of Conserved Exported Protein From Bacteroides Fragilis
PDB	3clw_E	0.0000000000004	159	609	11	496	A Chain A, Crystal Structure Of Conserved Exported Protein From Bacteroides Fragilis
PDB	3clw_D	0.0000000000004	159	609	11	496	A Chain A, Crystal Structure Of Conserved Exported Protein From Bacteroides Fragilis
PDB	3clw_C	0.0000000000004	159	609	11	496	A Chain A, Crystal Structure Of Conserved Exported Protein From Bacteroides Fragilis
PDB	3clw_B	0.0000000000004	159	609	11	496	A Chain A, Crystal Structure Of Conserved Exported Protein From Bacteroides Fragilis

EST Download unfiltered results here

Hit	Length	Start	End	EValue
DC939944	193	138	330	0
CN204446	203	261	463	0
CN203087	205	333	537	0
FE485920	267	171	435	0
CN204446	39	464	502	1.1

Orthologous Group
Species	ID
Ricinus communis	42430.m000025
Selaginella moellendorffii	98368

CAZyme Information