| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s175_122V6.1 |
| Family | AA1 |
| Protein Properties | Length: 328 Molecular Weight: 36362.1 Isoelectric Point: 9.272 |
| Chromosome | Chromosome/Scaffold: 175 Start: 798317 End: 799682 |
| Description | laccase 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 41 | 282 | 0 |
| TRVTRNCATVDIPTVNGRFPGPTIEVNEGDKLIVKVTNKQQYPVTLHWHGIKQFKTNYADGPAHITQCPIQPNKSYIYEFTVNDQRGTFFWHAHVNWMRA TVHGALIIHPKKTAPYGEVEGEIPIIMGEFFGLHPNVVELGFINTLTPVENKTSLASTINGFPGSFFNCSSATKVYKVKKDKTYLLRIIDAAINSDHYFA VANHSVTVVAADGNYLKPFETAYVPMSPGQTTEVLIKFDKPR | |||
| Full Sequence |
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| Protein Sequence Length: 328 Download |
| MSQNLDNLSV GTHLFSKRAL LYGHIRINSC VLPMICCRLR TRVTRNCATV DIPTVNGRFP 60 GPTIEVNEGD KLIVKVTNKQ QYPVTLHWHG IKQFKTNYAD GPAHITQCPI QPNKSYIYEF 120 TVNDQRGTFF WHAHVNWMRA TVHGALIIHP KKTAPYGEVE GEIPIIMGEF FGLHPNVVEL 180 GFINTLTPVE NKTSLASTIN GFPGSFFNCS SATKVYKVKK DKTYLLRIID AAINSDHYFA 240 VANHSVTVVA ADGNYLKPFE TAYVPMSPGQ TTEVLIKFDK PRGRYYFGMN AGPVPTVGAP 300 PPFVPAVAIM RVQTPVPPPF VPMIDTC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2132 | SufI | 1.0e-30 | 48 | 281 | 235 | + Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] | ||
| TIGR03388 | ascorbase | 1.0e-35 | 54 | 290 | 267 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| pfam07732 | Cu-oxidase_3 | 3.0e-48 | 40 | 152 | 115 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
| TIGR03389 | laccase | 4.0e-90 | 41 | 286 | 250 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001755400.1 | 0 | 42 | 320 | 43 | 327 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001766678.1 | 0 | 42 | 324 | 43 | 340 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001774336.1 | 0 | 43 | 170 | 1 | 128 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002448873.1 | 0 | 43 | 291 | 52 | 305 | hypothetical protein SORBIDRAFT_05g000680 [Sorghum bicolor] |
| RefSeq | XP_002520796.1 | 0 | 41 | 291 | 44 | 295 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 3e-37 | 46 | 286 | 18 | 277 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asq_A | 3e-37 | 46 | 286 | 18 | 277 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_B | 3e-37 | 46 | 286 | 18 | 277 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1asp_A | 3e-37 | 46 | 286 | 18 | 277 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1aso_B | 3e-37 | 46 | 286 | 18 | 277 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX658195 | 251 | 41 | 288 | 0 |
| DV974066 | 242 | 40 | 277 | 0 |
| GE474001 | 242 | 40 | 277 | 0 |
| FL817447 | 249 | 45 | 287 | 0 |
| FY912763 | 240 | 41 | 276 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Physcomitrella patens | Pp1s17_180V6.2 | Pp1s17_180V6.1 | Pp1s86_61V6.2 | Pp1s86_61V6.1 | |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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