Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s17_17V6.1 |
Family | GT34 |
Protein Properties | Length: 489 Molecular Weight: 56234.2 Isoelectric Point: 6.3056 |
Chromosome | Chromosome/Scaffold: 17 Start: 73553 End: 76050 |
Description | Galactosyl transferase GMA12/MNN10 family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT34 | 148 | 385 | 0 |
KPRTLLVSGSQPSPCANPMGDFYHLKFLKNRIDYARLHDLEFFYNMATFEKEMSSFWAKLPLLRKMMLNHPDVEWIWWMDSDAIFTDMTFEMPMEKYGKN NLIVHGFHNLLFEQQRWIGLNTGSFLIRNCQWSLDLLDALAPFGPEGTTRIEAGKLLTAKLVDRPVFEADDQSALVYLILFGDPKWKANTYIEWEFLLHG YWKYVVYNYEEIMAKNHPGYGDERWPFVTHFVGCKPCK |
Full Sequence |
---|
Protein Sequence Length: 489 Download |
MKEGTLLRKM SQDQMKAALH TYHPARFLAT PKGRKVVKTM NTFKITILCG FITLLVLRGT 60 LGPGGLTWGS SPQVADLREQ IIMSQRARVL AQVEEAIPDE VTASKFVEED QWDGVSPYTL 120 GPKITDWDLQ RELWNTRNPG RNRTVGGKPR TLLVSGSQPS PCANPMGDFY HLKFLKNRID 180 YARLHDLEFF YNMATFEKEM SSFWAKLPLL RKMMLNHPDV EWIWWMDSDA IFTDMTFEMP 240 MEKYGKNNLI VHGFHNLLFE QQRWIGLNTG SFLIRNCQWS LDLLDALAPF GPEGTTRIEA 300 GKLLTAKLVD RPVFEADDQS ALVYLILFGD PKWKANTYIE WEFLLHGYWK YVVYNYEEIM 360 AKNHPGYGDE RWPFVTHFVG CKPCKLGAST ENDECFKQME RAFNFADNQV LEKYGYTHTA 420 LGSFKTQKSR RDTTDPLGLQ QLQQNSTKRS KETVSNSTVK EESEEDIQEE LAQQAMAQEK 480 LAEMDLPE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam05637 | Glyco_transf_34 | 5.0e-59 | 147 | 385 | 266 | + galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34. | ||
PLN03181 | PLN03181 | 1.0e-113 | 118 | 422 | 341 | + glycosyltransferase; Provisional | ||
PLN03182 | PLN03182 | 0 | 23 | 454 | 434 | + xyloglucan 6-xylosyltransferase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016021 | integral to membrane |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001755245.1 | 0 | 40 | 488 | 1 | 449 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001756042.1 | 0 | 15 | 465 | 1 | 445 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001764909.1 | 0 | 32 | 475 | 10 | 455 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001768129.1 | 0 | 27 | 450 | 6 | 430 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001773763.1 | 0 | 15 | 463 | 1 | 449 | predicted protein [Physcomitrella patens subsp. patens] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
xyloglucan biosynthesis | RXN-12415 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
xyloglucan biosynthesis | RXN-9461 | EC-2.4.2.39 | xyloglucan 6-xylosyltransferase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
BY952139 | 227 | 109 | 335 | 0 |
DC936844 | 247 | 191 | 437 | 0 |
FC342750 | 255 | 3 | 257 | 0 |
FC364299 | 232 | 223 | 454 | 0 |
BY952139 | 24 | 334 | 357 | 0.006 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|