CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s183_28V6.1
FamilyAA7
Protein PropertiesLength: 586 Molecular Weight: 63787.5 Isoelectric Point: 8.2575
ChromosomeChromosome/Scaffold: 183 Start: 274263 End: 276301
DescriptionFAD-binding Berberine family protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA71245650
  PLYGVQVATTRDVQSAVKFAARHKLRVVVKTSGHDFLGRSSAAGSFLIWMHKWKNITIDESFVSCGGERGNPVVKVDGGVAWGEVYDALKGTGWIVLGGM
  SLTVSATGGFIQGGGHGALGPSFGLGADNVLQMEVVTADGEFRVVNACHDPELFFSLRGGGGGTFGVVVSVTYKLHKNPSNIVGAFLLLSPSNGTSWSVE
  TQEEILTVWSRGTVSLDAALWAGYWGFSSVQFVGELVVPATLAAANATLTPIVRALTQIENVTATYYVMRNHSTFQDWHAADYEVIYPGTLTDYTGHRVL
  LGSRIIPFSALKHPRRLAKSIVAAMALGGNGAVLGHMVIGPGVRAADPHRQTSVTTAWREGIWHLASWSTWEWNATEVTKLAARNNMKGFVKSLHSAFPN
  AGAYLNEASIDEPQWQRSFWGYSNYRRLMAVKLRVDPLGLFV
Full Sequence
Protein Sequence     Length: 586     Download
MLTNRVSIYF VFFLAIGAGV SRGDINLCRC VDSKSACWPS PEDWDAFNVT VCGRLILPKP    60
TGSPCHGPHR SATLCQHIRN NWFDAYLRAD NAGSMQSENW EDDGQKSCSM YAPESSVCHQ    120
GRVPLYGVQV ATTRDVQSAV KFAARHKLRV VVKTSGHDFL GRSSAAGSFL IWMHKWKNIT    180
IDESFVSCGG ERGNPVVKVD GGVAWGEVYD ALKGTGWIVL GGMSLTVSAT GGFIQGGGHG    240
ALGPSFGLGA DNVLQMEVVT ADGEFRVVNA CHDPELFFSL RGGGGGTFGV VVSVTYKLHK    300
NPSNIVGAFL LLSPSNGTSW SVETQEEILT VWSRGTVSLD AALWAGYWGF SSVQFVGELV    360
VPATLAAANA TLTPIVRALT QIENVTATYY VMRNHSTFQD WHAADYEVIY PGTLTDYTGH    420
RVLLGSRIIP FSALKHPRRL AKSIVAAMAL GGNGAVLGHM VIGPGVRAAD PHRQTSVTTA    480
WREGIWHLAS WSTWEWNATE VTKLAARNNM KGFVKSLHSA FPNAGAYLNE ASIDEPQWQR    540
SFWGYSNYRR LMAVKLRVDP LGLFVCRKCV GSELWKEDGN CNRHY* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR00387glcD9.0e-5132264136+
PLN02441PLN024418.0e-7131279162+
pfam08031BBE1.0e-952656439+
COG0277GlcD3.0e-18122312197+
pfam01565FAD_binding_46.0e-21124269148+
Gene Ontology
GO TermDescription
GO:0008762UDP-N-acetylmuramate dehydrogenase activity
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001248265.102957728566hypothetical protein CIMG_02036 [Coccidioides immitis RS]
RefSeqXP_001263995.103757435561FAD binding domain protein [Neosartorya fischeri NRRL 181]
RefSeqXP_001753121.10105852581predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001774865.10375751493predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_753129.203757435561FAD/FMN-containing protein [Aspergillus fumigatus Af293]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2bvh_D0.0000000000000113531550219A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB2bvh_C0.0000000000000113531550219A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB2bvh_B0.0000000000000113531550219A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB2bvh_A0.0000000000000113531550219A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB2bvg_D0.0000000000000113531550219A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DC930835230522810
DC9453522373505860
DC9464992123755860
DC931996991990
EH092233231362640
Orthologous Group
SpeciesID
Chlamydomonas reinhardtiig6385.t1Cre11.g476600.t1.2
Physcomitrella patensPp1s7_210V6.1
Selaginella moellendorffii40436523008679232.255.54379232.255.543230122
79232.125.25779232.125.257410688233866122509
22991010541345129478233
4373112240989041152901257
Volvox carteriVocar20002817mVocar20002967m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny