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Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s195_41V6.1 |
Family | GT35 |
Protein Properties | Length: 976 Molecular Weight: 108581 Isoelectric Point: 5.5785 |
Chromosome | Chromosome/Scaffold: 195 Start: 257813 End: 263254 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 190 | 969 | 0 |
ALHKLGYDLEAVAEQEPDAALGNGGLGRLASCFLDSLSTLNYPAWGYGLRYKYGLFQQSITKDGQKEQCEKWLEMGYPWEIPRNDISYPIKFFGQVAEGQ GGKREWVGGENVRAFAYDVPIPGFRTKNTISLRLWSTRVAAEDFDLAAFNSGDYSKAGEAHANAERICYVLYPGDATEEGKQLRLKQQYTLCSASIQDIM ARFKERSKGALNWDALPSKVAIQMNDTHPTLCVPELLRILIDEEGLAWDEAWKITQATVAYTNHTVLPEALEKWPLTTFQKLLPRHVEIIETIDEQFMSF VAGNVEKSELESKIASMRILENVDLPASIQSLLPPKPVREKAKKVKPVTDAAIKENGTKSPVKEAAAEEEEEEEEEVVPPKPASTVRMANLCVIAGHKVN GVAAIHSQIVIDEVFNDFYQLWPEKFQNKTNGVTPRRWLKFCNPELSSVITKWLGSEEWVLDTKQLSGLRNFADNKELQQEWVNAKVARKAKLAAYIKSK TGYTINPNALFDIQVKRIHEYKRQLLNIMGVIYRYKKMKEMSEKERAAKYVPRVVMFGGKAFATYWQAKRIVKLITDVAATVNNDPEIGDLLKVIMVPDY NVSVAEVLIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIREEVGEDNFFLFGAYAHEIAGLRADRAAGKFQPDPRFEEVKSFIRSGVF GDYDYNELLGSLEGDSGYGRGDYFLVGHDFPAYIECQDKVDEAYRDQQRWTRMSIMNTAGSYTFSSDRTIHEYAKDIWEI |
Full Sequence |
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Protein Sequence Length: 976 Download |
MGVSAALGAQ APIALSVSGA LGASSSLRRE SVCSTSGSSC CSWKMSISSG IKVGVLEGSS 60 DAALPCSNGI RAVASEPRAK KASAAGESDK DIKPQANPLS TNPSEIASNI KYHAEYTPSF 120 SPYKFELKQA YVATAESLRD TLIERWNQTY KHFSKENAKT IHYLSMEFLQ GRALLNAIGN 180 LELNDAYSEA LHKLGYDLEA VAEQEPDAAL GNGGLGRLAS CFLDSLSTLN YPAWGYGLRY 240 KYGLFQQSIT KDGQKEQCEK WLEMGYPWEI PRNDISYPIK FFGQVAEGQG GKREWVGGEN 300 VRAFAYDVPI PGFRTKNTIS LRLWSTRVAA EDFDLAAFNS GDYSKAGEAH ANAERICYVL 360 YPGDATEEGK QLRLKQQYTL CSASIQDIMA RFKERSKGAL NWDALPSKVA IQMNDTHPTL 420 CVPELLRILI DEEGLAWDEA WKITQATVAY TNHTVLPEAL EKWPLTTFQK LLPRHVEIIE 480 TIDEQFMSFV AGNVEKSELE SKIASMRILE NVDLPASIQS LLPPKPVREK AKKVKPVTDA 540 AIKENGTKSP VKEAAAEEEE EEEEEVVPPK PASTVRMANL CVIAGHKVNG VAAIHSQIVI 600 DEVFNDFYQL WPEKFQNKTN GVTPRRWLKF CNPELSSVIT KWLGSEEWVL DTKQLSGLRN 660 FADNKELQQE WVNAKVARKA KLAAYIKSKT GYTINPNALF DIQVKRIHEY KRQLLNIMGV 720 IYRYKKMKEM SEKERAAKYV PRVVMFGGKA FATYWQAKRI VKLITDVAAT VNNDPEIGDL 780 LKVIMVPDYN VSVAEVLIPA SELSQHISTA GMEASGTSNM KFSMNGCVLI GTLDGANVEI 840 REEVGEDNFF LFGAYAHEIA GLRADRAAGK FQPDPRFEEV KSFIRSGVFG DYDYNELLGS 900 LEGDSGYGRG DYFLVGHDFP AYIECQDKVD EAYRDQQRWT RMSIMNTAGS YTFSSDRTIH 960 EYAKDIWEIT PSPLE* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14985 | PRK14985 | 3.0e-89 | 154 | 490 | 337 | + maltodextrin phosphorylase; Provisional | ||
PRK14985 | PRK14985 | 2.0e-146 | 575 | 968 | 404 | + maltodextrin phosphorylase; Provisional | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 107 | 969 | 872 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 110 | 969 | 868 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 190 | 971 | 787 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001762173.1 | 0 | 75 | 974 | 20 | 922 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001775705.1 | 0 | 1 | 975 | 1 | 975 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002274575.1 | 0 | 89 | 971 | 90 | 977 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002279075.1 | 0 | 70 | 974 | 57 | 957 | PREDICTED: similar to Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic [Vitis vinifera] |
RefSeq | XP_002526085.1 | 0 | 34 | 974 | 5 | 976 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 113 | 971 | 51 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 113 | 971 | 51 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1z8d_A | 0 | 102 | 972 | 24 | 831 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2ffr_A | 0 | 102 | 972 | 12 | 819 | A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylam |
PDB | 4el5_A | 0 | 102 | 972 | 12 | 819 | A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylam |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 866 | 130 | 974 | 0 |
HO613954 | 510 | 468 | 974 | 0 |
HO418036 | 581 | 316 | 890 | 0 |
HO797178 | 399 | 576 | 974 | 0 |
HO778303 | 73 | 62 | 132 | 0.006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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