Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s196_21V6.1 |
Family | GH3 |
Protein Properties | Length: 801 Molecular Weight: 88840.7 Isoelectric Point: 5.8248 |
Chromosome | Chromosome/Scaffold: 196 Start: 193941 End: 199495 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 82 | 340 | 0 |
ANVSRLGIPPYQWWGEGLHGVAISPSVYFGGATPAATSFPLPCLSVCSYNRTLWNKIGQVVSTEGRAMYNQGRSGLTYWSPNINIARDPRWGRTQETPGE DPKLSSGYAVHFVKGLQEGDYDQNQPQAVSRGPRRLKISACCKHFTAHDLDRWKDYDRDHFDSKVTQQDLEDTYNPSFKSCVKEGQSSSVMCSYNRLNGI PMCTHYELLTLTVRNQWGFDGYIVSDCDAVALIHDYINYAPTSEDAVSYVMLAGMDLNC |
Full Sequence |
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Protein Sequence Length: 801 Download |
MKSTETVILA CILLGVMLLT TQLFEKPRIK VYKLQYACDP DGPADLLFPF CNTSISDDDR 60 VEDLISRLTI QEKIEQLVNT AANVSRLGIP PYQWWGEGLH GVAISPSVYF GGATPAATSF 120 PLPCLSVCSY NRTLWNKIGQ VVSTEGRAMY NQGRSGLTYW SPNINIARDP RWGRTQETPG 180 EDPKLSSGYA VHFVKGLQEG DYDQNQPQAV SRGPRRLKIS ACCKHFTAHD LDRWKDYDRD 240 HFDSKVTQQD LEDTYNPSFK SCVKEGQSSS VMCSYNRLNG IPMCTHYELL TLTVRNQWGF 300 DGYIVSDCDA VALIHDYINY APTSEDAVSY VMLAGMDLNC GSTTLVHGLA ALDKKLIWEG 360 LIDMHLRNLF RVRMRLGMFD GNPSTLPYGS LGPEDMCTED NQHLALEAAR QSLVLLKNEK 420 NALPWKKTHG LKLAVIGHHA DATREMLGNY EGYPCKFVSP LQGFAKVLSD HSPRISHERG 480 CSDAACEDQF YIYAAKEAAA QADAVVLVLG ISQAQEKEGR DRDSLLLPGR QMELVSSVVE 540 ASAGRPVVLV LLSGSPLDVS FANDDPRIQS IIWAGYPGQS GGEAIAEAIF GLVNPGGRLA 600 QSWYYENYTN IDMSNMNMRP NASTGYPGRT YRFFTDTPLW EFGHGLSYSD FKYTMVSAPQ 660 SIMAPHLRYQ LCSSDRAVMT SDLNCLHYEK EACKESSFHV RVWVINHGPL SGDHSVLLFS 720 KPPSRGIDGI PLKQLVSFER VHLEAGAGQE ILFKVNPCED LGTVGDDGIR TVELGEHTLM 780 VGMVQHVLTV ENWREGHGEL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-44 | 413 | 649 | 242 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 5.0e-50 | 72 | 465 | 399 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-53 | 72 | 372 | 306 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-60 | 49 | 783 | 821 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 35 | 791 | 762 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001775759.1 | 0 | 17 | 800 | 1 | 784 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784462.1 | 0 | 50 | 790 | 3 | 716 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002270249.1 | 0 | 36 | 791 | 29 | 759 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002513707.1 | 0 | 36 | 791 | 41 | 776 | Beta-glucosidase, putative [Ricinus communis] |
RefSeq | XP_002515300.1 | 0 | 36 | 791 | 28 | 759 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 73 | 782 | 61 | 722 | A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1,2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea |
PDB | 3u48_A | 0 | 73 | 782 | 61 | 722 | A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1,2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea |
PDB | 3u4a_B | 0 | 73 | 782 | 61 | 722 | A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1,2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea |
PDB | 3u4a_A | 0 | 73 | 782 | 61 | 722 | A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1,2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea |
PDB | 2x41_A | 1.00053e-42 | 59 | 782 | 2 | 699 | A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1,2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |