CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s198_141V6.1
FamilyGT92
Protein PropertiesLength: 522 Molecular Weight: 59809.6 Isoelectric Point: 8.776
ChromosomeChromosome/Scaffold: 198 Start: 677600 End: 679814
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922545070
  DYVYCGSSVYGNISPQRMREWMAYHARFFGDKAHFILHDSGGFHEDVRKVLEPWIKQGKVTLQNIRQQEIYDGYYHNQFLIVNDCLFRSRFMANWTFFFD
  VDEYMYVEPTTTLSQVLNENPNITQITIEQVPMAKDICVADNATRGDLKSSWGFEKLVYRKVLKPGLRYDRKYAVQARHAEAAGIHMSMNMLKGQNLYPK
  GDKIRYYHYHGTINKRGEVCKKFVDAGNKTALQTHDNHYHRLEETIAKMAKDVK
Full Sequence
Protein Sequence     Length: 522     Download
MKMEKHQTVI KVENETGRVK DKVRSKELRC HTAIKFHMRA FPDIRVNVIY TMVLAIGLCL    60
VVAQFSPLLG FDPKVWCAVM AKLEKLGKPE VSHPPQLISE ALFHEKINTS SIDLTHGELR    120
LFKPHGLATH LYIEMSAYRG GPRVFSIVGL ASKSLETHHN PPYACEWVSN STGEVVQGRS    180
HKVLPDWGYG KLYTVVVITC NFAKDVGVDG EDGELILLAS YGDQYRQPER IKVLSESKGE    240
YNGSIFNPQN FPYDYVYCGS SVYGNISPQR MREWMAYHAR FFGDKAHFIL HDSGGFHEDV    300
RKVLEPWIKQ GKVTLQNIRQ QEIYDGYYHN QFLIVNDCLF RSRFMANWTF FFDVDEYMYV    360
EPTTTLSQVL NENPNITQIT IEQVPMAKDI CVADNATRGD LKSSWGFEKL VYRKVLKPGL    420
RYDRKYAVQA RHAEAAGIHM SMNMLKGQNL YPKGDKIRYY HYHGTINKRG EVCKKFVDAG    480
NKTALQTHDN HYHRLEETIA KMAKDVKLYE LNTVGTQPFI V* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam01697Glyco_transf_921.0e-21253447206+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_565768.10120516100490unknown protein [Arabidopsis thaliana]
RefSeqXP_001758423.10525211472predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001758982.101305162386predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001775945.101205161397predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777796.101355211382predicted protein [Physcomitrella patens subsp. patens]
Transmembrane Domains
StartEnd
4668
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
GE4804472941204070
HO7805324071205170
DV9967542751203920
HO7963983801475170
BJ1832041992654630
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s227_17V6.1Pp1s35_63V6.1Pp1s32_144V6.1
Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1Pp1s25_268V6.1
Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)