| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s199_124V6.1 |
| Family | CBM57 |
| Protein Properties | Length: 470 Molecular Weight: 51151.3 Isoelectric Point: 4.2803 |
| Chromosome | Chromosome/Scaffold: 199 Start: 648248 End: 652225 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 207 | 355 | 1.7e-25 |
| GYDNVTDFGGRSWEADDTYTNNVKALLTSTRNVVGANVEPNYWPEKLYETCRYEQLPNVPIIYSYLVDAKLDYQIWFHFAEIDPNVTAAGQRVFNVTVNN VVVLAGLDLFQKVGLDTAFDFAYTLRNLTGGSLVISLVPQVGSPLICGI | |||
| Full Sequence |
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| Protein Sequence Length: 470 Download |
| MAGLLVLGLW LLGLLHSSLA AHGDYHVLID CGGYHNFSNS VNQTWMADNF FSGGAVANVS 60 IPQNFPRQQE RSLRYFPISQ GKKNCYDINV PVGRYMIQMF FAYNNYDNMS HSPSFDVSVE 120 GTVVFNWRFP WSDDSDNYGA YSDLYAFIHD GSATICFYSI GTDAPVIGSL ELLQVDDAAY 180 NASSTGQNAI LVNYGRISAG NSSFGPGYDN VTDFGGRSWE ADDTYTNNVK ALLTSTRNVV 240 GANVEPNYWP EKLYETCRYE QLPNVPIIYS YLVDAKLDYQ IWFHFAEIDP NVTAAGQRVF 300 NVTVNNVVVL AGLDLFQKVG LDTAFDFAYT LRNLTGGSLV ISLVPQVGSP LICGIEVIAV 360 LQADIATNVT EATAMHALKT SLNVPERMGW NGDPCAPTEW DAWEGVTCNL AADGSSLVIT 420 HMNIADQGLS GVLPPELTYL SHLISLNASS NKISGPFPAT FGEGSLVSL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 0.001 | 29 | 167 | 159 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| PLN00113 | PLN00113 | 0.0003 | 419 | 463 | 45 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-5 | 207 | 355 | 162 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 3.0e-45 | 29 | 357 | 350 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 2.0e-92 | 25 | 469 | 453 | + hypothetical protein; Provisional | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 16 | 469 | 19 | 474 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_564237.2 | 0 | 16 | 469 | 19 | 474 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 29 | 469 | 33 | 473 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 19 | 469 | 22 | 476 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 24 | 469 | 21 | 468 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.0000001 | 371 | 466 | 28 | 113 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
