| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s20_387V6.1 |
| Family | GH9 |
| Protein Properties | Length: 361 Molecular Weight: 39302 Isoelectric Point: 7.7666 |
| Chromosome | Chromosome/Scaffold: 20 Start: 2603664 End: 2605994 |
| Description | glycosyl hydrolase 9B13 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 1 | 359 | 0 |
| MACTITMLAWSVVEFGDNFRATGQLHNVLNNIRWGTDYFLSCYTEPEELWVQVGDAHANHRCWQRPEDMDTPRTAYKIDANNPGSDIAAETAAAFAAASM AFRRIDSEHSNTLIRSARRYRGKYSDSLPKAVCPFHCSYSGYHDELVWGAAWLFKATRQDRYLQYLVTNGKAFGGTTVPVNAFNWDNRYAGAQILAAKAI LGGTQGLQQAYKDSADDYICQVLPSSISPRSTTAYTPGGLLYQTGGSNLQGVTSAAFLLTSYARSLAMAKATVNCGGRQITPSQLTTIAQNQLPSMSALP QKIGYGQGYAYFNSNNPNPNLAMGAIVGGPDKDDNFTDVRSNFARLEPITNMNAPIAGV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 361 Download |
| MACTITMLAW SVVEFGDNFR ATGQLHNVLN NIRWGTDYFL SCYTEPEELW VQVGDAHANH 60 RCWQRPEDMD TPRTAYKIDA NNPGSDIAAE TAAAFAAASM AFRRIDSEHS NTLIRSARRY 120 RGKYSDSLPK AVCPFHCSYS GYHDELVWGA AWLFKATRQD RYLQYLVTNG KAFGGTTVPV 180 NAFNWDNRYA GAQILAAKAI LGGTQGLQQA YKDSADDYIC QVLPSSISPR STTAYTPGGL 240 LYQTGGSNLQ GVTSAAFLLT SYARSLAMAK ATVNCGGRQI TPSQLTTIAQ NQLPSMSALP 300 QKIGYGQGYA YFNSNNPNPN LAMGAIVGGP DKDDNFTDVR SNFARLEPIT NMNAPIAGVF 360 * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 5.0e-111 | 1 | 358 | 399 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-111 | 1 | 359 | 391 | + Glycosyl hydrolase family 9. | ||
| PLN03009 | PLN03009 | 6.0e-114 | 1 | 360 | 401 | + cellulase | ||
| PLN02308 | PLN02308 | 2.0e-115 | 1 | 360 | 399 | + endoglucanase | ||
| PLN02266 | PLN02266 | 1.0e-130 | 1 | 358 | 397 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001755693.1 | 0 | 1 | 360 | 70 | 466 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001765948.1 | 0 | 1 | 360 | 70 | 469 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001768182.1 | 0 | 1 | 360 | 98 | 492 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783755.1 | 0 | 1 | 360 | 70 | 466 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002320998.1 | 0 | 1 | 360 | 107 | 500 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 1 | 354 | 65 | 419 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 1ksc_A | 0 | 1 | 354 | 65 | 419 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
| PDB | 1ks8_A | 0 | 1 | 354 | 65 | 419 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 1 | 360 | 87 | 456 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 6e-39 | 1 | 354 | 66 | 431 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO788388 | 400 | 4 | 360 | 0 |
| CO125126 | 269 | 1 | 262 | 0 |
| DT336843 | 292 | 1 | 285 | 0 |
| ES903957 | 294 | 1 | 285 | 0 |
| GE632840 | 271 | 6 | 269 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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