| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s215_36V6.4 |
| Family | CE8 |
| Protein Properties | Length: 198 Molecular Weight: 21230.3 Isoelectric Point: 9.6771 |
| Chromosome | Chromosome/Scaffold: 215 Start: 242103 End: 244594 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 82 | 184 | 1.8e-27 |
| TVGKKGSGAKYTKVKAAIKSIPKGNSVRCVIRIAKGFYKEKIEIPKDKPYITIEGAGAGVTILSYGDTAEEAGSTSQSASFAVMSDYFVAKDLTFEVKKK KKK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 198 Download |
| MAISRAALLC TLVLATGFFL TVSSQTVPTP EEDFDAWIAR NQAKYEAQNS ESTVLDTQTL 60 PGGDFSVEAT PSPPQEATCI RTVGKKGSGA KYTKVKAAIK SIPKGNSVRC VIRIAKGFYK 120 EKIEIPKDKP YITIEGAGAG VTILSYGDTA EEAGSTSQSA SFAVMSDYFV AKDLTFEVKK 180 KKKKKKTNKQ TNETLSL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02497 | PLN02497 | 3.0e-17 | 82 | 176 | 95 | + probable pectinesterase | ||
| PLN02634 | PLN02634 | 5.0e-20 | 82 | 177 | 102 | + probable pectinesterase | ||
| pfam01095 | Pectinesterase | 5.0e-24 | 82 | 177 | 96 | + Pectinesterase. | ||
| PLN02665 | PLN02665 | 2.0e-25 | 1 | 176 | 178 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 2.0e-30 | 82 | 176 | 101 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001777108.1 | 0 | 82 | 177 | 1 | 96 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001778320.1 | 6e-29 | 79 | 177 | 22 | 120 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001782802.1 | 3e-27 | 83 | 177 | 2 | 96 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002330522.1 | 1e-18 | 83 | 177 | 85 | 185 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 3e-19 | 82 | 177 | 86 | 187 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.0000000005 | 83 | 177 | 11 | 104 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.0002 | 83 | 177 | 7 | 100 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.006 | 65 | 188 | 20 | 147 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
