| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s216_42V6.1 |
| Family | CE8 |
| Protein Properties | Length: 654 Molecular Weight: 71239 Isoelectric Point: 7.3758 |
| Chromosome | Chromosome/Scaffold: 216 Start: 577532 End: 580495 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 349 | 637 | 0 |
| PSIQAAVNDAPSWCPTRYVIYIKAGVYNEIVRVPKDKINLMFVGDGSNATIITGNLHVQTPGITTWLSATVAVTGAGFIARGISFENTAGPEQHQAVALR VESDKSAFQDCAILGHQDSLYTHSLRQFFKDCTVAGTVDFIFGNSAAMFQTCNIVVRVGQMNGSSTRLLTAQGRIDPGQKTSLVFQNCSVYGTPEYNALQ RAQPTQHRVYLGRPWKQYSRTVFIYTYMSEIVQPQGWSPWKGQFALDTLMDAEYGSYGPGAANVSQRIAWSTQLSFQQAQRFSAQRLVQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 654 Download |
| MSHSNLEPNP LANLKVRAGQ CTLASNPSLP VVEGMGKASR CLNGERANVD GKREMKDFQC 60 KPSKCKVRTT QIIERVVRFF ALLSLLAPSD CTQILRGYRE GRNLSAQASQ LRQLKQAPDP 120 VNTYNIELVC SATRYPASCL SALLLDARSV NAPPRRLVEI LTAISMEHSL AALLDGQTLA 180 TLVPTANNVN LTAVSAQCME LLDLAAYHMQ NSEAAFPARL FQDILAWLSG ALQQTNDCYY 240 ALTPFRSSTS SLAFVTEMTD RLNTTVELIS NSLALTGSMV SYGSDATGWK SPPESRVDQL 300 LELNETSNTD ISPGWMGVAD RAFLHAPSPQ AALDLGELVV TVALDSISPS IQAAVNDAPS 360 WCPTRYVIYI KAGVYNEIVR VPKDKINLMF VGDGSNATII TGNLHVQTPG ITTWLSATVA 420 VTGAGFIARG ISFENTAGPE QHQAVALRVE SDKSAFQDCA ILGHQDSLYT HSLRQFFKDC 480 TVAGTVDFIF GNSAAMFQTC NIVVRVGQMN GSSTRLLTAQ GRIDPGQKTS LVFQNCSVYG 540 TPEYNALQRA QPTQHRVYLG RPWKQYSRTV FIYTYMSEIV QPQGWSPWKG QFALDTLMDA 600 EYGSYGPGAA NVSQRIAWST QLSFQQAQRF SAQRLVQADS WLPAAAITYL PLV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 1.0e-109 | 186 | 649 | 482 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02506 | PLN02506 | 9.0e-110 | 130 | 649 | 549 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 3.0e-110 | 80 | 650 | 582 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 4.0e-144 | 340 | 639 | 305 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 1.0e-146 | 104 | 646 | 553 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK24298.1 | 0 | 104 | 644 | 34 | 556 | unknown [Picea sitchensis] |
| RefSeq | XP_001777164.1 | 0 | 126 | 641 | 1 | 512 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783919.1 | 0 | 77 | 651 | 5 | 575 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002306241.1 | 0 | 130 | 646 | 57 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 130 | 646 | 50 | 552 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 340 | 649 | 9 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 350 | 650 | 17 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-23 | 350 | 643 | 20 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-23 | 350 | 643 | 20 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 8e-23 | 350 | 643 | 20 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| DT627100 | 260 | 345 | 602 | 0 |
| DR475154 | 283 | 365 | 643 | 0 |
| EX324674 | 278 | 370 | 643 | 0 |
| EX320538 | 275 | 354 | 623 | 0 |
| DR052632 | 255 | 365 | 615 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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