Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s21_381V6.1 |
Family | GT8 |
Protein Properties | Length: 553 Molecular Weight: 63632.1 Isoelectric Point: 5.3053 |
Chromosome | Chromosome/Scaffold: 21 Start: 2280360 End: 2282955 |
Description | plant glycogenin-like starch initiation protein 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 226 | 449 | 1.4013e-45 |
EQLAARTGNERRQAYVSMVHTDASYVCGAIVLAHSIRLSGSTRDLVMLVDSSILPEQRRALQAAGWQVREIERIRNPYAEKDRYNEWNYSKFRLWQITEY DKIVFIDSDLLVLRNIDFLFQLPEISATGNDQNRFNSGVMVIEPSNCTFGILLDQIMDTRSYNGGDQGYLNEIFPWWHRLPKRVNFLKHFWSNDTDELET KTRLFGEDPPELYVLHYLGMKPWV |
Full Sequence |
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Protein Sequence Length: 553 Download |
MRNCRPRVRS DPCTSNLPEV NDIDDGGRGA SSDGKSITGN VALLLGQNLQ LGKRPSIGLL 60 NIGKDEALGW QEYAHGRIPI FFPFAQVNQS LAWSDFYPEW IDEEELFETP MCPSLPFPCV 120 REKTKLDLLV AKVSCQNPQE SGGERNVQRL QLFLSAASIA SQTGDEAMDV LIISECRPPL 180 NIFPCGELLE HEGKMWLYHV NLVNMRSRLV LPVGSCELSL SINYPEQLAA RTGNERRQAY 240 VSMVHTDASY VCGAIVLAHS IRLSGSTRDL VMLVDSSILP EQRRALQAAG WQVREIERIR 300 NPYAEKDRYN EWNYSKFRLW QITEYDKIVF IDSDLLVLRN IDFLFQLPEI SATGNDQNRF 360 NSGVMVIEPS NCTFGILLDQ IMDTRSYNGG DQGYLNEIFP WWHRLPKRVN FLKHFWSNDT 420 DELETKTRLF GEDPPELYVL HYLGMKPWVC FRDYDCNWNL KEQQKYASDS AHATWFKIHD 480 SMPENLQRQC WLRTLAKAAR EVERREAEAG SYSDGHWKIK IRDPRLELCP TPEHCDWEEM 540 IRHWNEPPPQ AL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00505 | Glyco_transf_8 | 9.0e-14 | 238 | 449 | 254 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
cd06914 | GT8_GNT1 | 5.0e-17 | 239 | 399 | 171 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
PLN00176 | PLN00176 | 2.0e-18 | 220 | 399 | 225 | + galactinol synthase | ||
pfam01501 | Glyco_transf_8 | 2.0e-42 | 244 | 450 | 249 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 2.0e-86 | 238 | 482 | 255 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS90653.1 | 0 | 47 | 549 | 157 | 658 | putative glycogenin [Oryza sativa Japonica Group] |
GenBank | EEC79261.1 | 0 | 47 | 549 | 157 | 658 | hypothetical protein OsI_20036 [Oryza sativa Indica Group] |
GenBank | EEE63788.1 | 0 | 47 | 549 | 170 | 671 | hypothetical protein OsJ_18611 [Oryza sativa Japonica Group] |
RefSeq | XP_001756144.1 | 0 | 1 | 552 | 1 | 552 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002456736.1 | 0 | 47 | 546 | 113 | 611 | hypothetical protein SORBIDRAFT_03g041660 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 3e-22 | 238 | 472 | 5 | 237 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
PDB | 3u2x_A | 3e-22 | 238 | 472 | 5 | 237 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
PDB | 3u2w_B | 3e-22 | 238 | 472 | 5 | 237 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
PDB | 3u2w_A | 3e-22 | 238 | 472 | 5 | 237 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
PDB | 3u2v_B | 3e-22 | 238 | 472 | 5 | 237 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO253323 | 299 | 196 | 494 | 0 |
EX355703 | 297 | 196 | 492 | 0 |
FG552677 | 318 | 143 | 457 | 0 |
GR707193 | 285 | 212 | 494 | 0 |
HE627905 | 251 | 232 | 482 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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