Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s223_30V6.1 |
Family | GT8 |
Protein Properties | Length: 1128 Molecular Weight: 126310 Isoelectric Point: 5.1463 |
Chromosome | Chromosome/Scaffold: 223 Start: 209225 End: 215701 |
Description | plant glycogenin-like starch initiation protein 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 796 | 1014 | 5.30001e-40 |
DSDSQKEAYATILHSGSDYVCGAIATAHSIRKSGSTRDLVILVDSSISPEQRQALQEAGWKVRDLERVYKSYTVEGKQYERDFSRFRLWQLTEYNKVIYV EADVLVLRNLDHLFTMPEISASGSTKTLFNSGVMVIEPSSCTFQLFVDEMEKSESEIGGDWDFFNRIFPWWHRIPRHMNYLKYFWTRSRTSEVNYSNRLF SSDPPQLYAIHYWGYKPWQ |
Full Sequence |
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Protein Sequence Length: 1128 Download |
MITMLEFHDL TNNRKFHCHS LVSFEVSVSV SDVEALLKIS VLGNVGNEML KHAQRKTSVI 60 GNVGKDMLNH ARRKYESNGL EKHLKLRQFF TRLRLGRFGY LLLVFAALGT LTVPLMFQDA 120 LPAQLDQDLA RDMNAQYTKE RGVDEPFNRK IKLAEEKIIY EEGKESSEIV GNEHGHLTGV 180 SDTEKSEEDE LASKGKTAAL LVSEDVKLSD PAQLWRKPDQ TEGESSEVLH VPFDRKSEVD 240 ISGGRTERQH KRTPSKASRR RRNRSKHLSV VEEEPKRAHR KNEAGFHDRR SERGDKVDSH 300 ATVSSVEAFS SNSIEETSNI APPGAHFTND TEGSSNGFNE AFKEVLKLAS EANQTAGKNS 360 VHLQEKNSVT ESLSADKSAE LDVQAIGSVD VVSQKLSEER EQTAENGTLA SVGLNPEEHD 420 RDISVHEGKD IELEVSHSNQ TESTSAREEG AIETLEVVPV EEKNNPQIVN LSDKMENSRN 480 DESQTSTANS GSEGTTTAGD TKINASDSRE DVGSSNESNI VQGSDPVVDV VEPSREANNH 540 LQSSSAVDGG KLADSMENNK NTPDSQDEGN SKVTGAVDGS SSEEHEMQTE VRQENSNELP 600 QESVIISSLR QRAASGTLRS GLLNVEAIDL QHWQFLAGES PIVVPLERVN EGMDWTEFYP 660 EWIDEEEKYG TPKCPAVPMP KVSSEVKLDM VIARASCSVS SSLHEVWKQP ASLQVLLGAA 720 SLAVNAGNGN VYVLILSECR PLVNLFSCGE LLEHRDQGWL YQVNIEQLRK RISMPVGSCQ 780 LSIPLEGQDS SLKMGDSDSQ KEAYATILHS GSDYVCGAIA TAHSIRKSGS TRDLVILVDS 840 SISPEQRQAL QEAGWKVRDL ERVYKSYTVE GKQYERDFSR FRLWQLTEYN KVIYVEADVL 900 VLRNLDHLFT MPEISASGST KTLFNSGVMV IEPSSCTFQL FVDEMEKSES EIGGDWDFFN 960 RIFPWWHRIP RHMNYLKYFW TRSRTSEVNY SNRLFSSDPP QLYAIHYWGY KPWQCFRDYD 1020 CNWNSNQHFA SDEAHARWFK VYDELPENLQ KHCALSTGTK AYLEHNRRTA EAAALEDKHW 1080 AITIKDPRLN VCQEGHCDWK ALLSIWDKTV NTTSAVVVST RTQFIRK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00505 | Glyco_transf_8 | 7.0e-12 | 807 | 1013 | 246 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
cd06914 | GT8_GNT1 | 2.0e-16 | 804 | 957 | 166 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
PLN00176 | PLN00176 | 2.0e-17 | 801 | 963 | 202 | + galactinol synthase | ||
pfam01501 | Glyco_transf_8 | 4.0e-33 | 805 | 1015 | 254 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 3.0e-66 | 802 | 1045 | 254 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS90653.1 | 0 | 614 | 1120 | 162 | 667 | putative glycogenin [Oryza sativa Japonica Group] |
GenBank | EEC79261.1 | 0 | 613 | 1120 | 161 | 667 | hypothetical protein OsI_20036 [Oryza sativa Indica Group] |
RefSeq | XP_001756144.1 | 0 | 621 | 1108 | 58 | 546 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777541.1 | 0 | 587 | 1121 | 1 | 535 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783069.1 | 0 | 577 | 1117 | 6 | 541 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2w_B | 0.0000000000003 | 802 | 1018 | 5 | 226 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 3u2w_A | 0.0000000000003 | 802 | 1018 | 5 | 226 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 3qvb_A | 0.0000000000003 | 802 | 1018 | 5 | 226 | A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose |
PDB | 3q4s_A | 0.0000000000003 | 802 | 1018 | 5 | 226 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
PDB | 3u2t_A | 0.0000000000003 | 802 | 1018 | 26 | 247 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) Complexed With Manganese |