CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s227_17V6.1
FamilyGT92
Protein PropertiesLength: 504 Molecular Weight: 58131.6 Isoelectric Point: 8.663
ChromosomeChromosome/Scaffold: 227 Start: 86224 End: 89596
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922414740
  DYVYCGSSVYGNISPQRMREWMAYHAKFFGEKSHFILHDAGGFHEDVRKVLEPWIRQGRVTLQNIRQQEIYDGYYHNQFMVVNDCLFRSRFLANWTFFFD
  IDEYMYVDPSTTLSDVLNEKPDVSQIVIKQVPIESGLCVADNTRDQHERWLTERLIYRRVLKHGIHYDRKYAVQARHAEATGIHMSMNLRRGKTRVLQDE
  RLRYYHYHGTITNRGNLCNKFVDSKNKTAVKSVQ
Full Sequence
Protein Sequence     Length: 504     Download
MEREHSVLKV EAGREKACSR PQLGCSTPIK FSTIRLNIIY PMVMAIVLFL VVTQLLSLSG    60
FGIKFWCTET TKVVGLETQL SPSLPQGSFL DENIDTSSID LRHGDVRLFK PHGLATYLYI    120
DMSAYRGSPR HFSIVGLTAK SIEKHHKPPY ACEWVSSSND KVVKGHAYKI LPDWDYGKLY    180
TVVVITCVFA EDVGTDGEGG ELVLYASYGD RYRQPERVVV LTEVKGEYNS SVFDTKSFPY    240
DYVYCGSSVY GNISPQRMRE WMAYHAKFFG EKSHFILHDA GGFHEDVRKV LEPWIRQGRV    300
TLQNIRQQEI YDGYYHNQFM VVNDCLFRSR FLANWTFFFD IDEYMYVDPS TTLSDVLNEK    360
PDVSQIVIKQ VPIESGLCVA DNTRDQHERW LTERLIYRRV LKHGIHYDRK YAVQARHAEA    420
TGIHMSMNLR RGKTRVLQDE RLRYYHYHGT ITNRGNLCNK FVDSKNKTAV KSVQLRLDET    480
MMKMAKDVKS YELKMIGKQP FVL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam01697Glyco_transf_921.0e-21240434211+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001758423.10425031472predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001758982.101174972385predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001775945.101074971396predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777796.101225031382predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_002533995.10107499117514conserved hypothetical protein [Ricinus communis]
Transmembrane Domains
StartEnd
3658
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BJ1832041972524480
HO7805324021074990
GE4804472771073810
DV9967542751073790
HO7963983751344990
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s35_63V6.1Pp1s32_144V6.1
Pp1s112_159V6.1Pp1s237_6V6.1Pp1s225_53V6.1Pp1s556_1V6.1Pp1s25_268V6.1
Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)