CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s231_59V6.1
FamilyGT4
Protein PropertiesLength: 535 Molecular Weight: 59403.8 Isoelectric Point: 8.073
ChromosomeChromosome/Scaffold: 231 Start: 534222 End: 536836
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43354738.6e-24
  VLGAAGRLVRDKGHPLLFEAFSEIRKKHKDVYLLVAGSGPWGDRYEELAPNAKTLGPLTPLQLADFYNAVDIFVNPTLRSQGLDHTLLEAMQCGKPLLAT
  HFSSIVWSVITDPTFGYTFSPNVESLVAALEQVVTDGKE
Full Sequence
Protein Sequence     Length: 535     Download
MMGEKPRWRS GAAKGNLGAM AVSWRLVWAV MLSGSLLCYV MVLMGSASCR SNVGFEGSDA    60
RNFANSGKLS TNGADGVDLA LWSGDVRDLS TAWNRLCYGS KPPQRINIAL FVKKWPTGGT    120
PGGLERHAMT LHRVLADRGH VVHVFTMRQP GATTSDEDEE AQEEQRHPNM HLHFVKPNAG    180
GGFDHSRAWE KFSEINATHP FDIVHSESVA LPHWRAREIE KLAASWHGIA FEVIHSDIVQ    240
DLIRKPGEPR SQELSQSMGG RLARVADEVR FFPSYKHHVA TSDYVGDVLR TIYELPLQKV    300
HIILNGVNEQ EFRPNPFAGA AFRAKYGVPE NASLVLGAAG RLVRDKGHPL LFEAFSEIRK    360
KHKDVYLLVA GSGPWGDRYE ELAPNAKTLG PLTPLQLADF YNAVDIFVNP TLRSQGLDHT    420
LLEAMQCGKP LLATHFSSIV WSVITDPTFG YTFSPNVESL VAALEQVVTD GKEKLWEKGQ    480
TCLAYASKMF TAKKMASAYE RLFLCMTNET HCMYPLPIDE QECRSRKHGR RALL*         540
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
TIGR00032argG4.0e-33107502410+
COG0438RfaG2.0e-33106509412+
cd03811GT1_WabH_like2.0e-34107436343+
cd03798GT1_wlbH_like5.0e-44122502392+
cd03801GT1_YqgM_like1.0e-58107503410+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001769489.10775232448predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001778030.10.000001126126predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001778030.108453415459predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_002303479.108251459488predicted protein [Populus trichocarpa]
RefSeqXP_002519899.108251556486glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3okp_A0.0000001305433170308A Chain A, Crystal Structure Of Human Glcat-S Apo Form
PDB3okc_A0.0000001305433170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form)
PDB3oka_B0.0000001305433170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3oka_A0.0000001305433170308A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form)
PDB3mbo_H0.000311550343402A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate
Transmembrane Domains
StartEnd
2143
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
BJ95031021712170
BY974246213482600
BJ942645210112200
BY9819002011173170
BJ157188195102040
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126mCiclev10003490m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny