CAZyme Information

Basic Information
SpeciesPhyscomitrella patens
Cazyme IDPp1s237_6V6.1
FamilyGT92
Protein PropertiesLength: 489 Molecular Weight: 55746.8 Isoelectric Point: 7.5126
ChromosomeChromosome/Scaffold: 237 Start: 12010 End: 15475
DescriptionDomain of unknown function (DUF23)
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT922134430
  DMTFCGSPLYGNISPQRIREWIAYHAYFLGNRTLFIFQDAGGIHDDVYRVLKPWIDLGQVLVENLRQAEVYEGYYHHQFTMLNDCLLRSQTLSNWTFFFD
  VDEFLFSSGDKKPVDLLAENARNNVTQFLFKTVKMSDGLCLKENKRESDSHFMAKISRKWAFEKLVYAKCDYGWTTVESRKYAVQPQMVWATGVHYSEHM
  KQGKRIDMDPDVLRSYHYHNTVNGRTELCKE
Full Sequence
Protein Sequence     Length: 489     Download
MKSQKSLVEN IPTSGLGFNA VVVLVVINCL LLVFQISSSG SLYERAWWPT EAQPMPCANI    60
TIAMDENLDM SSIDLSRGEV RSFRAHGIAT RLIVEVGSYR NGPRTFSSVV LTSKRLNNLH    120
DILYECEWAT ADSPTLKVKA RAIKPDWNMG ELYGTMVIVC TFPKDVGTKS EGGRLILTAH    180
YPGAFRTPER FIALTEMQGE YNASRFQPPY PYDMTFCGSP LYGNISPQRI REWIAYHAYF    240
LGNRTLFIFQ DAGGIHDDVY RVLKPWIDLG QVLVENLRQA EVYEGYYHHQ FTMLNDCLLR    300
SQTLSNWTFF FDVDEFLFSS GDKKPVDLLA ENARNNVTQF LFKTVKMSDG LCLKENKRES    360
DSHFMAKISR KWAFEKLVYA KCDYGWTTVE SRKYAVQPQM VWATGVHYSE HMKQGKRIDM    420
DPDVLRSYHY HNTVNGRTEL CKEFPKNPNG EPNSLKVKNC TIDKSMADLG PAVRSYEFAM    480
VGEQPFIL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13704Glyco_tranf_2_40.004229329102+
pfam01697Glyco_transf_925.0e-23212464273+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_001757048.106848485501predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001758982.10924823385predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001767951.10814441349predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001777796.10964881382predicted protein [Physcomitrella patens subsp. patens]
RefSeqXP_001778370.10814471356predicted protein [Physcomitrella patens subsp. patens]
Transmembrane Domains
StartEnd
1335
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO780532421814840
GE480447297813740
ES799092299813790
HO7963983931094840
DV996754276813530
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00278.2Aquca_030_00278.1Aquca_007_00975.1
Arabidopsis lyrata492851494517902431
Arabidopsis thalianaAT5G44670.1AT4G20170.1AT2G33570.1AT5G48190.1AT3G60990.1
AT3G07380.1
Brachypodium distachyonBradi1g42556.1Bradi1g35710.2Bradi1g35710.1Bradi3g53170.1
Brassica rapaBra020933Bra033759Bra022944Bra005484
Carica papayaevm.model.supercontig_1291.2evm.model.supercontig_36.102
Capsella rubellaCarubv10004512mCarubv10026267mCarubv10023079m
Citrus clementinaCiclev10014882m
Citrus sinensisorange1.1g009350m
Cucumis sativusCucsa.049020.1
Eucalyptus grandisEucgr.E04328.1Eucgr.F03619.1
Fragaria vescamrna19924.1-v1.0-hybridmrna29146.1-v1.0-hybrid
Glycine maxGlyma09g05300.2Glyma15g16630.1Glyma16g14690.1Glyma08g36030.2
Gossypium raimondiiGorai.008G052100.1Gorai.007G359700.1Gorai.006G138000.1
Linum usitatissimumLus10008076Lus10038387Lus10024731Lus10036247
Malus domesticaMDP0000126481MDP0000126479MDP0000661922MDP0000203716
Manihot esculentacassava4.1_005572mcassava4.1_005594mcassava4.1_006235m
Medicago truncatulaMedtr8g070700.1
Mimulus guttatusmgv1a004537mmgv1a005071m
Oryza sativaLOC_Os06g22330.1LOC_Os02g48190.1LOC_Os06g41910.1
Panicum virgatumPavirv00018157mPavirv00039959mPavirv00055571mPavirv00069450mPavirv00047984m
Pavirv00032304m
Physcomitrella patensPp1s35_57V6.1Pp1s98_254V6.1Pp1s198_141V6.1Pp1s227_17V6.1Pp1s35_63V6.1
Pp1s32_144V6.1Pp1s112_159V6.1Pp1s225_53V6.1Pp1s556_1V6.1Pp1s25_268V6.1
Pp1s401_34V6.1Pp1s88_162V6.1
Phaseolus vulgarisPhvul.009G244900.1Phvul.003G275200.1
Picea abiesMA_2788g0010MA_102296g0010MA_630451g0010MA_127644g0010MA_169299g0010
MA_43513g0010MA_401686g0010MA_10433350g0010MA_99230g0010MA_960165g0010.252.357
MA_960165g0010.252.357MA_960165g0010.360.466MA_960165g0010.360.466MA_898638g0010
Populus trichocarpaPotri.001G074600.1Potri.003G156600.1Potri.005G258900.1
Prunus persicappa004238mppa025548m
Ricinus communis28563.m00009330170.m014246
Setaria italicaSi017001mSi006264m
Selaginella moellendorffii77156406883
Sorghum bicolorSb10g013010.1Sb10g024570.1Sb04g030080.1
Thellungiella halophilaThhalv10024965mThhalv10000855mThhalv10016550m
Vitis viniferaGSVIVT01010061001GSVIVT01013454001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)