Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s23_181V6.2 |
Family | GH5 |
Protein Properties | Length: 432 Molecular Weight: 48620.8 Isoelectric Point: 5.2663 |
Chromosome | Chromosome/Scaffold: 23 Start: 1412695 End: 1414745 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 58 | 387 | 7.9e-32 |
DGHPLYVNGWNSYWLMSQAVEESTRSRVTNIFKHGAALGMTVCRSWAFNDAAYDALQETVGVYSEQAFKALDFVVMEAGRYGVRLLLTLVNNLPDYGGKT CYVQWARDAGIVLDGDTDDHFFSHPILRNYYKAHVKTVLTRVNSFTNVEYRNDPTIFGWELINEPRCAQESSSGAFQAWIEEMAAYVKSLDSKHLLTIGL EGFYKKSGKGTSTVNPHYMPGSGTDFIENHEVDGIDFATVHAYPDLWMPWEDHSEKQKFFDAWVDAHIKDADEILQMPVLFSEFGLLNSQERLAMYTSMY DRIYESAKYRGAGGGALAWQLLDEEMANVW |
Full Sequence |
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Protein Sequence Length: 432 Download |
MRGSPKAIPP RFKFVTFFVA LSLHFAAVTA NLRADHESIQ IQSHRAFVGR DGKNFVLDGH 60 PLYVNGWNSY WLMSQAVEES TRSRVTNIFK HGAALGMTVC RSWAFNDAAY DALQETVGVY 120 SEQAFKALDF VVMEAGRYGV RLLLTLVNNL PDYGGKTCYV QWARDAGIVL DGDTDDHFFS 180 HPILRNYYKA HVKTVLTRVN SFTNVEYRND PTIFGWELIN EPRCAQESSS GAFQAWIEEM 240 AAYVKSLDSK HLLTIGLEGF YKKSGKGTST VNPHYMPGSG TDFIENHEVD GIDFATVHAY 300 PDLWMPWEDH SEKQKFFDAW VDAHIKDADE ILQMPVLFSE FGLLNSQERL AMYTSMYDRI 360 YESAKYRGAG GGALAWQLLD EEMANVWDDG FAIFPGQDLP MIHLIKLQSC RSKLLPSSSD 420 ECLDGDQSSS L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 8.0e-20 | 122 | 353 | 234 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001756671.1 | 0 | 46 | 411 | 1 | 366 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001760262.1 | 0 | 47 | 415 | 8 | 380 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001762204.1 | 0 | 45 | 419 | 4 | 378 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001774665.1 | 0 | 7 | 428 | 3 | 428 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784893.1 | 0 | 47 | 422 | 11 | 390 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 43 | 414 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 9.99995e-41 | 56 | 378 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 9.99995e-41 | 56 | 378 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 9.99995e-41 | 56 | 378 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 9.99995e-41 | 56 | 378 | 21 | 342 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |