Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s251_37V6.1 |
Family | GT31 |
Protein Properties | Length: 637 Molecular Weight: 72261.4 Isoelectric Point: 7.0798 |
Chromosome | Chromosome/Scaffold: 251 Start: 315359 End: 318274 |
Description | galactosyltransferase1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT31 | 389 | 579 | 0 |
RMSIRRTWMQYPEVRNGTVVVRFFVGLHQNEQVNRELWTESLTYGDVQLLPMVDYYDIITYKTLAICMFAKYNVNAKYVMKTDDDTFLRVDAVLSSIFVT KPNSTLLIPKYNQSLLLGNIAWNDAPARNPDNKWFMSTKDWANKTYPPWAHGPGYVISLDIALFVVKGHQKDFLKFYKLEDVAMGIWIDRF |
Full Sequence |
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Protein Sequence Length: 637 Download |
MNYRSSAIDL EIPLLWAPAP SLEAVPRQDG NSSLPVDSDI IVPTPSVVLR QGNKDGDPIL 60 PTYTDTSIIS EYPTLLPGIN KAPKLEPIWR YLASYMRRRS VPKAATKAMK EGLRAWRKIN 120 KTMIDETHER VMDGSNRRNG NKCPYLVSAL NASELKSIPY IVPIPCGLIL DSSVTVVGTP 180 GIKTGTFSLE LIGSKLFGEG DEPVVFHFSV RLHGDELTNK PSIVQNTWTV SRDWHDEQRC 240 PPLPDEDDPE STVDGLRICN TDVGQNITRE SGRRPWKGLN QRSTNVWFPF VEGFPFVATI 300 SAGWDGYHVS VNGKHITAFK YRQNLEPWMV NSFRIKGDLN ISSVIANGLP ISDDASYVPD 360 LKVIRAPKLP KNTTLFIGVF STNSNFFPRM SIRRTWMQYP EVRNGTVVVR FFVGLHQNEQ 420 VNRELWTESL TYGDVQLLPM VDYYDIITYK TLAICMFAKY NVNAKYVMKT DDDTFLRVDA 480 VLSSIFVTKP NSTLLIPKYN QSLLLGNIAW NDAPARNPDN KWFMSTKDWA NKTYPPWAHG 540 PGYVISLDIA LFVVKGHQKD FLKFYKLEDV AMGIWIDRFA HLEHKVVKYV HDDHYQHGGC 600 ENDYIITHYQ NPSQMQCLWN NELEGEHGIC CYDQTI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00908 | Gal-bind_lectin | 4.0e-18 | 165 | 344 | 180 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
cd00070 | GLECT | 3.0e-24 | 159 | 344 | 186 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
pfam00337 | Gal-bind_lectin | 7.0e-25 | 159 | 344 | 186 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
pfam01762 | Galactosyl_T | 3.0e-26 | 389 | 578 | 198 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
PLN03133 | PLN03133 | 0 | 89 | 634 | 558 | + beta-1,3-galactosyltransferase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0006486 | protein glycosylation |
GO:0008378 | galactosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001779109.1 | 0 | 1 | 636 | 1 | 650 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002269607.1 | 0 | 89 | 631 | 92 | 633 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316134.1 | 0 | 80 | 634 | 82 | 632 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519288.1 | 0 | 81 | 631 | 114 | 660 | conserved hypothetical protein [Ricinus communis] |
RefSeq | XP_002522444.1 | 0 | 89 | 633 | 93 | 631 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wt2_B | 0.0008 | 147 | 322 | 21 | 142 | A Chain A, Peanut Peroxidase |
PDB | 2wt2_A | 0.0008 | 147 | 322 | 21 | 142 | A Chain A, Peanut Peroxidase |
PDB | 2wt1_A | 0.0008 | 147 | 322 | 21 | 142 | A Chain A, Peanut Peroxidase |
PDB | 2wt0_A | 0.0008 | 147 | 322 | 21 | 142 | A Chain A, Peanut Peroxidase |
PDB | 2wsv_A | 0.0008 | 147 | 322 | 21 | 142 | A Chain A, Peanut Peroxidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GT047837 | 321 | 288 | 607 | 0 |
EX425945 | 321 | 236 | 546 | 0 |
FE516201 | 288 | 298 | 582 | 0 |
GT034010 | 309 | 306 | 612 | 0 |
BJ845064 | 268 | 315 | 579 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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