Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s261_25V6.1 |
Family | GH100 |
Protein Properties | Length: 573 Molecular Weight: 64981.7 Isoelectric Point: 6.835 |
Chromosome | Chromosome/Scaffold: 261 Start: 158855 End: 163011 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH100 | 104 | 558 | 0 |
PHPMIADAWETLRKSMVFFRSKPVGTIAALDPTEDSLNYNQVFVRDFVPSALAFLMNGEPEIVKNFLLKTLRLQSIEKRIDCFTLGEGVMPASFKVLHDP ARKTDTMIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDHSLADMPDCQRGMRLILTLCLADGFDTFPTLLCADGCCMVDRRMGIYGYPIEIQSLFLM ALRSAKSLIKAEGEGKEFLERIDKRLHALSFHMREYFWLDHQQLNNIYRFKTEEYSHTAVNKFNVIPDSIPDWIFDFLPLKGGFFIGNVSPARMDFRWFA IGNFMAILASLATSEQAAAIMDLLEARWPELVGDMPLKVSYPAMEGHEWRVVTGCDPKNTRWSYHNAGSWPVILWMLTAACIKTGRPQIARRAIEQVETR LAKDGWPEYYDGKLGRYVGKQARKFQTWSIAGYLVAKMMLEDPSHLGMIGLEEDK |
Full Sequence |
---|
Protein Sequence Length: 573 Download |
MNSPQRPLTL ETSWESLRRT IDSNPVDNGS IDFERPMEVR PRQIENHHSL DERSLNDIIS 60 SGLSSPRPPR QLETVKSSEC LEALLSPSIR SSAGTPREYH AFEPHPMIAD AWETLRKSMV 120 FFRSKPVGTI AALDPTEDSL NYNQVFVRDF VPSALAFLMN GEPEIVKNFL LKTLRLQSIE 180 KRIDCFTLGE GVMPASFKVL HDPARKTDTM IADFGESAIG RVAPVDSGFW WIILLRAYTK 240 STGDHSLADM PDCQRGMRLI LTLCLADGFD TFPTLLCADG CCMVDRRMGI YGYPIEIQSL 300 FLMALRSAKS LIKAEGEGKE FLERIDKRLH ALSFHMREYF WLDHQQLNNI YRFKTEEYSH 360 TAVNKFNVIP DSIPDWIFDF LPLKGGFFIG NVSPARMDFR WFAIGNFMAI LASLATSEQA 420 AAIMDLLEAR WPELVGDMPL KVSYPAMEGH EWRVVTGCDP KNTRWSYHNA GSWPVILWML 480 TAACIKTGRP QIARRAIEQV ETRLAKDGWP EYYDGKLGRY VGKQARKFQT WSIAGYLVAK 540 MMLEDPSHLG MIGLEEDKKM KPSLTRSASW TA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 4.0e-5 | 146 | 572 | 441 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 31 | 571 | 543 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 27 | 571 | 548 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 110 | 546 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 110 | 565 | 462 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001758344.1 | 0 | 107 | 572 | 1 | 467 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777804.1 | 0 | 37 | 572 | 1 | 536 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001779600.1 | 0 | 107 | 572 | 1 | 466 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001782510.1 | 0 | 37 | 572 | 1 | 537 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002276670.1 | 0 | 19 | 571 | 15 | 571 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
ES848839 | 359 | 206 | 562 | 0 |
HO466454 | 457 | 107 | 560 | 0 |
ES809234 | 324 | 233 | 556 | 0 |
CK269009 | 329 | 243 | 571 | 0 |
HO811217 | 462 | 110 | 565 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|