| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s26_167V6.1 |
| Family | GH17 |
| Protein Properties | Length: 346 Molecular Weight: 37713.6 Isoelectric Point: 6.9469 |
| Chromosome | Chromosome/Scaffold: 26 Start: 1295920 End: 1297424 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 32 | 342 | 0 |
| VGICYGRVADNLPSPPEVVSLLRSRGVTDVKIYDAAGDILRAFENSGIILSVAVPNEEVAGIADSQVMANSWVEKNIRPYPQTKIGSLGVGNEFLSDGRN DASKLVPAMNNIQQALESAGLNHIKVSTPLAFQLSVSYPPSAGQFADKDLSVVSGILDFVRRKNSVFMMNIYPFFAYRFDSVNIDINYALFNPNAPTIND SGRAYRNLFDAQVDSVYAAMSRLGYANTPLMITETGWASDGGGVGASLLNAKTYNNNLVQHVLRNGTPVRPNVKIQTFIFALFNENQKQGYPIEKNFGLY YPDKRPVYDIR | |||
| Full Sequence |
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| Protein Sequence Length: 346 Download |
| MGSVEVGSDV PDLHYGGGKG SEKHRDRCPT TVGICYGRVA DNLPSPPEVV SLLRSRGVTD 60 VKIYDAAGDI LRAFENSGII LSVAVPNEEV AGIADSQVMA NSWVEKNIRP YPQTKIGSLG 120 VGNEFLSDGR NDASKLVPAM NNIQQALESA GLNHIKVSTP LAFQLSVSYP PSAGQFADKD 180 LSVVSGILDF VRRKNSVFMM NIYPFFAYRF DSVNIDINYA LFNPNAPTIN DSGRAYRNLF 240 DAQVDSVYAA MSRLGYANTP LMITETGWAS DGGGVGASLL NAKTYNNNLV QHVLRNGTPV 300 RPNVKIQTFI FALFNENQKQ GYPIEKNFGL YYPDKRPVYD IRLQA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 121 | 335 | 220 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 9.0e-109 | 32 | 341 | 313 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_568822.1 | 0 | 32 | 343 | 27 | 346 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_001757143.1 | 0 | 32 | 343 | 1 | 311 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001757144.1 | 0 | 1 | 345 | 1 | 345 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001780506.1 | 0 | 32 | 341 | 31 | 350 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001780679.1 | 0 | 31 | 345 | 13 | 337 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 32 | 343 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 32 | 343 | 1 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 32 | 343 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 32 | 343 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1ghs_B | 0 | 32 | 343 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BJ582819 | 175 | 172 | 346 | 0 |
| BJ177678 | 135 | 1 | 135 | 0 |
| EX358649 | 296 | 32 | 321 | 0 |
| DR387205 | 282 | 42 | 321 | 0 |
| DR165967 | 288 | 50 | 334 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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