Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s27_70V6.1 |
Family | AA5 |
Protein Properties | Length: 541 Molecular Weight: 58504.8 Isoelectric Point: 8.7354 |
Chromosome | Chromosome/Scaffold: 27 Start: 542533 End: 544249 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 28 | 536 | 0 |
QGTWQILVGNAGIASMHTAITHYDTAILLDRTNIGASQIPLPNGQCRDNSQELVLKHDCTAHSVMLDTKTNSVRALWVQTDTWCSSGQFISDGTMVQTGG DYEGLYKIRRLTPCAANENCNWVESTTEALTDPRWYASNQLLPDGSRQIVVGGRNAFSYEFVPKRRTGEGAFALQLLRDTNTNQGDNMYPYVHLIPNGNL FIMANRDSIELDYTTNTVVKKFPTIPGEPRNYPSAGSSVLLPLDQANQFTLTEILVCGGARANAFTNSGAQYPASQSCGRIDVNAASPTWSMETMPMPRT MGDMVILPTGDVLIINGAEKGSQGWGKASAAILTPVLYATKNARARFTTLAAGTIPRVYHSTANLLSDGKVLVAGSNTHQYYTLTGQFPTELRVESYSPA YLAARSNNIRPTITTAPGTIRYGQTFPMTFTVGALQGALEVKMVNAPFVTHSYAMGQRMLNLKLTAPVSAPTVGAYSVVVTAPPSNVVAPSSYYMLFLVQ DGIPGKAIW |
Full Sequence |
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Protein Sequence Length: 541 Download |
MIKLAGVPRL VAILVVMFSS YLQLSKAQGT WQILVGNAGI ASMHTAITHY DTAILLDRTN 60 IGASQIPLPN GQCRDNSQEL VLKHDCTAHS VMLDTKTNSV RALWVQTDTW CSSGQFISDG 120 TMVQTGGDYE GLYKIRRLTP CAANENCNWV ESTTEALTDP RWYASNQLLP DGSRQIVVGG 180 RNAFSYEFVP KRRTGEGAFA LQLLRDTNTN QGDNMYPYVH LIPNGNLFIM ANRDSIELDY 240 TTNTVVKKFP TIPGEPRNYP SAGSSVLLPL DQANQFTLTE ILVCGGARAN AFTNSGAQYP 300 ASQSCGRIDV NAASPTWSME TMPMPRTMGD MVILPTGDVL IINGAEKGSQ GWGKASAAIL 360 TPVLYATKNA RARFTTLAAG TIPRVYHSTA NLLSDGKVLV AGSNTHQYYT LTGQFPTELR 420 VESYSPAYLA ARSNNIRPTI TTAPGTIRYG QTFPMTFTVG ALQGALEVKM VNAPFVTHSY 480 AMGQRMLNLK LTAPVSAPTV GAYSVVVTAP PSNVVAPSSY YMLFLVQDGI PGKAIWSLIR 540 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 1.0e-23 | 437 | 536 | 101 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 2.0e-32 | 433 | 536 | 105 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-112 | 43 | 286 | 245 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001757263.1 | 0 | 1 | 540 | 1 | 540 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001774105.1 | 0 | 10 | 536 | 11 | 525 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001776127.1 | 0 | 11 | 540 | 16 | 550 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001783776.1 | 0 | 24 | 539 | 9 | 524 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784508.1 | 0 | 11 | 540 | 19 | 550 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vz3_A | 0.0000002 | 326 | 540 | 439 | 636 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2vz1_A | 0.0000002 | 326 | 540 | 439 | 636 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2jkx_A | 0.0000002 | 326 | 540 | 439 | 636 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2eie_A | 0.0000002 | 326 | 540 | 439 | 636 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |
PDB | 1goh_A | 0.0000002 | 326 | 540 | 439 | 636 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |