Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s281_1V6.1 |
Family | GT8 |
Protein Properties | Length: 555 Molecular Weight: 62751.5 Isoelectric Point: 8.2167 |
Chromosome | Chromosome/Scaffold: 281 Start: 1414 End: 7176 |
Description | galacturonosyltransferase-like 7 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT8 | 272 | 531 | 0 |
ERLVHIAMTLDINYLRGSMAAIYSILRHAECSGNIRFHFVATNGKEKLEKVVAETLPFLQFQTYPFDESLVKSRISYAVRHALEEPLNYARFYLAHMIDP CVKRIIYLDSDVLVIDRIEELWMINMGNSTVGTPEYCHANFHSYFTERFWRNSSLASIFANKKPCYFNSGVMLINLDRWRKEACTATLEYWMEVQKERHI YELGSLPPLLLTFAGSIQAIDSRWNQHGLGGDILRGDCRPTRNEPASLLHWSGGGKPWQR |
Full Sequence |
---|
Protein Sequence Length: 555 Download |
MAPSATMWRL LPPWQNLHNG AIVSIWPCMP GFHRCSLGLR TPTCMLVDQP AAPDVAEYRQ 60 SHSTQLWLTT LPLAIVVTIF LVSIAAQDFN GVDTTSQTQP QFPAYRRVHT GIPFKTRVST 120 SWSITTSKLG HFFDVKRFHP KSLRSNQSAS TRPVKIPEYE STTGQLLGVE SVGEHPHPSV 180 QRAAKSSSRS NIGLLPDLVS YSNEGLPLAQ GQRQLKNQER FTKPSSTIEQ LEKSQFPRFR 240 KAVSLPNRTC SDASQCIDSN CDNEAQGSFC NERLVHIAMT LDINYLRGSM AAIYSILRHA 300 ECSGNIRFHF VATNGKEKLE KVVAETLPFL QFQTYPFDES LVKSRISYAV RHALEEPLNY 360 ARFYLAHMID PCVKRIIYLD SDVLVIDRIE ELWMINMGNS TVGTPEYCHA NFHSYFTERF 420 WRNSSLASIF ANKKPCYFNS GVMLINLDRW RKEACTATLE YWMEVQKERH IYELGSLPPL 480 LLTFAGSIQA IDSRWNQHGL GGDILRGDCR PTRNEPASLL HWSGGGKPWQ RLDIHQPCPV 540 DSIWAQYDLL EPSG* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02910 | PLN02910 | 5.0e-25 | 358 | 548 | 199 | + polygalacturonate 4-alpha-galacturonosyltransferase |
PLN02523 | PLN02523 | 1.0e-26 | 358 | 549 | 198 | + galacturonosyltransferase |
cd06429 | GT8_like_1 | 4.0e-38 | 275 | 547 | 293 | + GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. |
cd04194 | GT8_A4GalT_like | 9.0e-39 | 275 | 530 | 277 | + A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS. |
pfam01501 | Glyco_transf_8 | 4.0e-62 | 276 | 533 | 260 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62993.1 | 0 | 232 | 552 | 52 | 365 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_001760568.1 | 0 | 265 | 553 | 1 | 274 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001770768.1 | 0 | 279 | 554 | 1 | 276 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001780550.1 | 0 | 279 | 554 | 1 | 280 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002302739.1 | 0 | 224 | 549 | 50 | 362 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0000000004 | 360 | 531 | 84 | 254 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
PDB | 1g9r_A | 0.0000000004 | 360 | 531 | 84 | 254 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.000000001 | 360 | 531 | 84 | 254 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
BJ582239 | 195 | 361 | 555 | 0 |
GO360348 | 284 | 270 | 553 | 0 |
BX834858 | 280 | 270 | 549 | 0 |
CK246717 | 285 | 265 | 549 | 0 |
DY287293 | 320 | 234 | 551 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|