| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s2985_1V6.1 |
| Family | GH2 |
| Protein Properties | Length: 329 Molecular Weight: 36955.3 Isoelectric Point: 4.923 |
| Chromosome | Chromosome/Scaffold: 2985 Start: 104 End: 1090 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 1 | 329 | 0 |
| VWVNGTSVGTHRGGYSSFSFDITPHVKEGANVVTVYAEDDVRSGSQPRGKQSERFHSHGCDYTRTTGIWQTVWLEQVPETYLADMKVVADPANACVHLEV KVSGNTAGAQLKASAFYEGKEVGEATAVVQGPCVKVTVPVSEVHLWEAGHGRLYDLKLSLERPDLTDADAVDSYFGLRTVRLDGLAFRINEKSVFQRLVL DQGFYPDGIYTAPTDEDLRNDIEISLGLGFNGARLHEKMFEPRFLYWADRLGYLVWGEHANWGLDITTPASLSRFLPEWLEGVERDYNHPAVIGWCPFNE TWDRDGAKQDNEVLRIVYETTKRLDPTRP | |||
| Full Sequence |
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| Protein Sequence Length: 329 Download |
| VWVNGTSVGT HRGGYSSFSF DITPHVKEGA NVVTVYAEDD VRSGSQPRGK QSERFHSHGC 60 DYTRTTGIWQ TVWLEQVPET YLADMKVVAD PANACVHLEV KVSGNTAGAQ LKASAFYEGK 120 EVGEATAVVQ GPCVKVTVPV SEVHLWEAGH GRLYDLKLSL ERPDLTDADA VDSYFGLRTV 180 RLDGLAFRIN EKSVFQRLVL DQGFYPDGIY TAPTDEDLRN DIEISLGLGF NGARLHEKMF 240 EPRFLYWADR LGYLVWGEHA NWGLDITTPA SLSRFLPEWL EGVERDYNHP AVIGWCPFNE 300 TWDRDGAKQD NEVLRIVYET TKRLDPTRP |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-14 | 1 | 78 | 79 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 8.0e-15 | 1 | 328 | 358 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 6.0e-20 | 1 | 329 | 373 | + beta-D-galactosidase; Reviewed | ||
| PRK10150 | PRK10150 | 1.0e-30 | 1 | 329 | 377 | + beta-D-glucuronidase; Provisional | ||
| COG3250 | LacZ | 5.0e-33 | 1 | 329 | 352 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY16476.1 | 0 | 1 | 329 | 108 | 432 | putative hydrolase [Bifidobacterium breve] |
| RefSeq | XP_001786589.1 | 0 | 1 | 329 | 212 | 540 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | YP_002882885.1 | 0 | 1 | 329 | 106 | 444 | glycoside hydrolase family 2 sugar binding [Beutenbergia cavernae DSM 12333] |
| RefSeq | YP_003010527.1 | 0 | 1 | 329 | 106 | 435 | Beta-galactosidase [Paenibacillus sp. JDR-2] |
| RefSeq | YP_003244809.1 | 0 | 1 | 329 | 105 | 432 | Beta-galactosidase [Geobacillus sp. Y412MC10] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3k4a_B | 9e-25 | 1 | 329 | 99 | 442 | A Chain A, Crystal Structure Of Selenomethionine Substituted E. Coli Beta- Glucuronidase |
| PDB | 3k4a_A | 9e-25 | 1 | 329 | 99 | 442 | A Chain A, Crystal Structure Of Selenomethionine Substituted E. Coli Beta- Glucuronidase |
| PDB | 3lpg_B | 9e-25 | 1 | 329 | 99 | 442 | A Chain A, Crystal Structure Of Selenomethionine Substituted E. Coli Beta- Glucuronidase |
| PDB | 3lpg_A | 9e-25 | 1 | 329 | 99 | 442 | A Chain A, Crystal Structure Of Selenomethionine Substituted E. Coli Beta- Glucuronidase |
| PDB | 3lpf_B | 9e-25 | 1 | 329 | 99 | 442 | A Chain A, Structure Of E. Coli Beta-Glucuronidase Bound With A Novel, Potent Inhibitor 1-((6,7-Dimethyl-2-Oxo-1,2-Dihydroquinolin-3-Yl)methyl)-1- (2-Hydroxyethyl)-3-(3-Methoxyphenyl)thiourea |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| FC009120 | 236 | 1 | 222 | 1e-23 |
| DY615511 | 368 | 1 | 329 | 1e-22 |
| GE150866 | 179 | 8 | 182 | 2e-19 |
| DY269333 | 185 | 1 | 180 | 0.00000000000001 |
| FP222680 | 143 | 189 | 328 | 0.0000000000001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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