| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s298_71V6.1 |
| Family | GH5 |
| Protein Properties | Length: 595 Molecular Weight: 66744.3 Isoelectric Point: 6.1235 |
| Chromosome | Chromosome/Scaffold: 298 Start: 476925 End: 478709 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 47 | 476 | 6.6e-39 |
| IIDSGGRERVFHGLNVVMKAFPWHPRTDEFDPQFSFTDVDIALLRSWGVNVVRLGVMWPGVEPQRGQVNQTYIEVMRTVVRKLHAAGIATLLEFHQDLLS SRFCGEGIPSWVLDNTNLGGTDSENLLAEINDVSSSSAGSSSTWWRILRDIVVNFIPSLLMQSSRYESNHRASTFSASKSFIESFPEPLSGRWPLPDSPG DSSHEQQPSDEQCDKHSWAWYYFSFAVSRAFQSLYDNKWGWADLFANYWQIVATSFRDQPGILGYELINEPWAGDMYRNPLLMVPGVADYHNLAPFYEKL QSSIRSVDPDRILFMESITFEDIRCGFSTVPGGAQFQNRTVLSYHFYQPPNVNSRQAIRERLRESKKLGCGAMLTEFFVADQGAISPRNSWNLFNADRVD DVLAEADAHKQSWIAWEYKAFQVKTGSVVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 595 Download |
| MLKAMMQMSR SRQSSMILVG VLLESILNLS AVEGISEYHV DNTSGSIIDS GGRERVFHGL 60 NVVMKAFPWH PRTDEFDPQF SFTDVDIALL RSWGVNVVRL GVMWPGVEPQ RGQVNQTYIE 120 VMRTVVRKLH AAGIATLLEF HQDLLSSRFC GEGIPSWVLD NTNLGGTDSE NLLAEINDVS 180 SSSAGSSSTW WRILRDIVVN FIPSLLMQSS RYESNHRAST FSASKSFIES FPEPLSGRWP 240 LPDSPGDSSH EQQPSDEQCD KHSWAWYYFS FAVSRAFQSL YDNKWGWADL FANYWQIVAT 300 SFRDQPGILG YELINEPWAG DMYRNPLLMV PGVADYHNLA PFYEKLQSSI RSVDPDRILF 360 MESITFEDIR CGFSTVPGGA QFQNRTVLSY HFYQPPNVNS RQAIRERLRE SKKLGCGAML 420 TEFFVADQGA ISPRNSWNLF NADRVDDVLA EADAHKQSWI AWEYKAFQVK TGSVVEQSLF 480 TSSGDVNLLL AKKLARTYPQ AVAGTILSFS FELISSDFTL SFIAGRPSAS GGISHQTQVF 540 VHRPFYYPSG LAFSVNHDCV QVQETERLII LSHSQACAGF TVSLKISKKP VQNF* 600 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG2723 | BglB | 0.004 | 84 | 144 | 66 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] |
| TIGR03356 | BGL | 0.0003 | 86 | 144 | 63 | + beta-galactosidase. |
| pfam00150 | Cellulase | 3.0e-7 | 291 | 462 | 184 | + Cellulase (glycosyl hydrolase family 5). |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB16370.1 | 9e-29 | 40 | 163 | 34 | 156 | endoglycoceramidase [Cyanea nozakii] |
| DDBJ | BAB16370.1 | 0 | 229 | 589 | 158 | 503 | endoglycoceramidase [Cyanea nozakii] |
| Swiss-Prot | Q9GV16 | 9e-29 | 40 | 163 | 34 | 156 | EGCSE_CYANO RecName: Full=Endoglycoceramidase; Short=EGCase; AltName: Full=Glycosphingolipid-specific enzyme; Short=GSL-specific enzyme; Flags: Precursor |
| Swiss-Prot | Q9GV16 | 0 | 229 | 589 | 158 | 503 | EGCSE_CYANO RecName: Full=Endoglycoceramidase; Short=EGCase; AltName: Full=Glycosphingolipid-specific enzyme; Short=GSL-specific enzyme; Flags: Precursor |
| RefSeq | XP_001781266.1 | 0 | 40 | 522 | 1 | 432 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2osx_A | 0.00002 | 264 | 396 | 169 | 300 | A Chain A, Endo-glycoceramidase Ii From Rhodococcus Sp.: Ganglioside Gm3 Comp |
| PDB | 2osx_A | 0.0006 | 43 | 153 | 33 | 138 | A Chain A, Endo-glycoceramidase Ii From Rhodococcus Sp.: Ganglioside Gm3 Comp |
| PDB | 2oym_B | 0.00002 | 264 | 396 | 169 | 300 | A Chain A, Endo-glycoceramidase Ii From Rhodococcus Sp.: Ganglioside Gm3 Comp |
| PDB | 2oym_B | 0.0006 | 43 | 153 | 33 | 138 | A Chain A, Endo-glycoceramidase Ii From Rhodococcus Sp.: Ganglioside Gm3 Comp |
| PDB | 2oym_A | 0.00002 | 264 | 396 | 169 | 300 | A Chain A, Endo-glycoceramidase Ii From Rhodococcus Sp.: Ganglioside Gm3 Comp |
