Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s2_413V6.1 |
Family | AA3 |
Protein Properties | Length: 564 Molecular Weight: 62449.4 Isoelectric Point: 7.2077 |
Chromosome | Chromosome/Scaffold: 2 Start: 2108538 End: 2110964 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 7 | 561 | 4.7e-39 |
TTYNNLITQQSETQQRLFAEYTGNGQDFDIVIVGSGIGGGILADDIADNSNRLRILVIEAGSYLFPTHVYNVSRFPNASVASKYGVQNFTQTGDDNTQYY IGEQPQLNLGGRSIFWSGLIPSVQPWELQFFPPNVRSRLSADLKEAQNKLNVSVTMGNTAQNIVKALQQSPLAEHFDIRETPRALHQPYLTPSGAPAKEF FLEPTGVFNTAELLINQIGLKPQDPNAANQNRLQLLLNHYVESVEKRGDGRCTLQVKDIIGKRIRQFTARAVVLAAGSLESPKIIRRSPVFNSLSQAIKD IVGQGLTDHPTTNWIQGNVTHIGNTEIPRNGHAKIVFYSRGLREAGPGSPIRYPFNIEMNVNHEYWHLRENDPTSPEVSVGIKESVVEIKFSFGNLLDDE NTLNLSSGTTYVPQIQFKNLKWMDDLSQNRFRNLAGWRKTNPEIFAVLNDLVYKIFSQFRKDGAPASPVGYLGQDGRGFGYGTVHHSVGTLRMPATNRLD SGDFSAPSVVDEDLMVRGHPGLYVCDMSVLPYSSSANPVLSLAALTLQLSRHLRN |
Full Sequence |
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Protein Sequence Length: 564 Download |
MSGFTETTYN NLITQQSETQ QRLFAEYTGN GQDFDIVIVG SGIGGGILAD DIADNSNRLR 60 ILVIEAGSYL FPTHVYNVSR FPNASVASKY GVQNFTQTGD DNTQYYIGEQ PQLNLGGRSI 120 FWSGLIPSVQ PWELQFFPPN VRSRLSADLK EAQNKLNVSV TMGNTAQNIV KALQQSPLAE 180 HFDIRETPRA LHQPYLTPSG APAKEFFLEP TGVFNTAELL INQIGLKPQD PNAANQNRLQ 240 LLLNHYVESV EKRGDGRCTL QVKDIIGKRI RQFTARAVVL AAGSLESPKI IRRSPVFNSL 300 SQAIKDIVGQ GLTDHPTTNW IQGNVTHIGN TEIPRNGHAK IVFYSRGLRE AGPGSPIRYP 360 FNIEMNVNHE YWHLRENDPT SPEVSVGIKE SVVEIKFSFG NLLDDENTLN LSSGTTYVPQ 420 IQFKNLKWMD DLSQNRFRNL AGWRKTNPEI FAVLNDLVYK IFSQFRKDGA PASPVGYLGQ 480 DGRGFGYGTV HHSVGTLRMP ATNRLDSGDF SAPSVVDEDL MVRGHPGLYV CDMSVLPYSS 540 SANPVLSLAA LTLQLSRHLR NTL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00732 | GMC_oxred_N | 0.0001 | 254 | 317 | 68 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
pfam05199 | GMC_oxred_C | 3.0e-15 | 487 | 553 | 67 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 2.0e-17 | 247 | 561 | 342 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001751963.1 | 0 | 1 | 563 | 1 | 563 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_388379.1 | 4e-26 | 34 | 559 | 21 | 532 | hypothetical protein FG08203.1 [Gibberella zeae PH-1] |
RefSeq | YP_001518838.1 | 0 | 8 | 563 | 162 | 669 | dehydrogenase, putative [Acaryochloris marina MBIC11017] |
RefSeq | YP_001802867.1 | 0 | 6 | 559 | 4 | 556 | hypothetical protein cce_1451 [Cyanothece sp. ATCC 51142] |
RefSeq | YP_245632.1 | 0.000000001 | 34 | 559 | 22 | 475 | glucose-methanol-choline (GMC) oxidoreductase [Bacillus cereus E33L] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC400164 | 269 | 154 | 422 | 0 |
BJ585069 | 131 | 434 | 564 | 0 |
BJ941632 | 147 | 1 | 147 | 0 |
BJ589266 | 102 | 463 | 564 | 0 |
BJ585069 | 24 | 411 | 434 | 0.00003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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