Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s301_24V6.1 |
Family | CBM43 |
Protein Properties | Length: 214 Molecular Weight: 22496.3 Isoelectric Point: 4.5895 |
Chromosome | Chromosome/Scaffold: 301 Start: 270476 End: 273262 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 65 | 151 | 1.6e-30 |
WCIAKTNVSDTDLQSSLDWACGPGTDQGQVNCGPVQVGGSCYDPNTLYNHASWAFNAYFQRMNAIDEACVFAGTAQKTTVDPSTGTC |
Full Sequence |
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Protein Sequence Length: 214 Download |
MRIAMANQCG VVALSAVLLF LPLLGVALGE RSETDLTFDV SMITLDKQSY NYRAQERKLA 60 TSFVWCIAKT NVSDTDLQSS LDWACGPGTD QGQVNCGPVQ VGGSCYDPNT LYNHASWAFN 120 AYFQRMNAID EACVFAGTAQ KTTVDPSTGT CIFPGSNVTT NGNLTGNGTF APANSPGGAP 180 GSLGSPSAAT AGFEPRYFLR ASTAVTLLTY LFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-18 | 65 | 139 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 65 | 153 | 89 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001754106.1 | 2e-28 | 65 | 147 | 1 | 83 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771005.1 | 2e-33 | 61 | 147 | 1 | 87 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781380.1 | 0 | 65 | 147 | 1 | 83 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002316541.1 | 8e-27 | 61 | 179 | 322 | 436 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525141.1 | 1e-28 | 64 | 169 | 32 | 133 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-18 | 65 | 157 | 13 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |