| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s304_43V6.1 |
| Family | GH5 |
| Protein Properties | Length: 539 Molecular Weight: 59712.7 Isoelectric Point: 7.1579 |
| Chromosome | Chromosome/Scaffold: 304 Start: 307861 End: 311991 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 232 | 516 | 1.20512e-43 |
| LANGWGAEAAVNVFQKHRESFVQESDFRFLASKGINAVRIPVGYWIASDPNPPAPYVSGSLQALDNGFQWANNHGIKIIIDLHAAPGSQNGQEHSSSRDG IAEWAVQVGIDYIGESIKTIDFLASRYGNNQALLGIELLNEPGAAVVPLDVLKDYYARGYSTVRKYTSSAYVIMCQRIGGDFTELANVLPADKVVLDVHF YNLFNHELFDKKTPEWNIDFVYNDRLSLVKRLNTAGNALIFVGEWTNEWMVENASQSDYLRFGAAQLQVFGQATFGWAYWSYQHQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 539 Download |
| MVVARLLVRG YLVLGLMILI VHHQSLLPGC FTNDAHPRAC VPGGVVALQP ERSLFDASKV 60 RAVSLGGWLV IEKWMKTSLF DGIPDGDLLD GAQISLQSIS RGTYLSAERG GGDRMVVNRT 120 AISTWETFKV WRVSAGVYQL RVFNKMFVSA MNGGGGAVLA SAASPAQWES FKIHRNPSQS 180 SMVHIQAYNG MYLQARDRNL LTADLKDVPG WNKNDATFIM VVNTPLGGEY QLANGWGAEA 240 AVNVFQKHRE SFVQESDFRF LASKGINAVR IPVGYWIASD PNPPAPYVSG SLQALDNGFQ 300 WANNHGIKII IDLHAAPGSQ NGQEHSSSRD GIAEWAVQVG IDYIGESIKT IDFLASRYGN 360 NQALLGIELL NEPGAAVVPL DVLKDYYARG YSTVRKYTSS AYVIMCQRIG GDFTELANVL 420 PADKVVLDVH FYNLFNHELF DKKTPEWNID FVYNDRLSLV KRLNTAGNAL IFVGEWTNEW 480 MVENASQSDY LRFGAAQLQV FGQATFGWAY WSYQHQLYRW SFKQSVQQGY LNAPTSGW* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.0006 | 93 | 210 | 118 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 2.0e-19 | 248 | 513 | 281 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-24 | 223 | 513 | 330 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABR16246.1 | 0 | 57 | 531 | 25 | 509 | unknown [Picea sitchensis] |
| RefSeq | XP_001781495.1 | 0 | 16 | 538 | 2 | 543 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002310872.1 | 0 | 60 | 531 | 1 | 471 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 58 | 531 | 28 | 509 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 54 | 534 | 11 | 491 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3n9k_A | 3e-34 | 229 | 536 | 50 | 388 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 2pbo_A | 4e-34 | 229 | 536 | 51 | 389 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
| PDB | 2pc8_A | 4e-34 | 229 | 536 | 51 | 389 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
